RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 NYAP2Q9P242 653 aa23.95■■□□□ 1.42
HDAC2-207ENST00000520170 RIPK3Q9Y572 518 aa23.95■■□□□ 1.42
HDAC2-207ENST00000520170 TACC3Q9Y6A5 838 aa23.95■■□□□ 1.42
HDAC2-207ENST00000520170 A0A1W2PQ45 241 aaPredicted RBP23.94■■□□□ 1.42
HDAC2-207ENST00000520170 A0A1W2PQY0 241 aa23.94■■□□□ 1.42
HDAC2-207ENST00000520170 TSHZ3Q63HK5 1081 aa23.94■■□□□ 1.42
HDAC2-207ENST00000520170 GIMAP6Q6P9H5 292 aa23.94■■□□□ 1.42
HDAC2-207ENST00000520170 CPXCR1Q8N123 301 aa23.94■■□□□ 1.42
HDAC2-207ENST00000520170 PRPF38AQ8NAV1 312 aaKnown RBP23.94■■□□□ 1.42
HDAC2-207ENST00000520170 CLIP2Q9UDT6 1046 aa23.94■■□□□ 1.42
HDAC2-207ENST00000520170 PQBP1O60828 265 aaKnown RBP23.93■■□□□ 1.42
HDAC2-207ENST00000520170 CLTBP09497 229 aa23.93■■□□□ 1.42
HDAC2-207ENST00000520170 APPBP2Q92624 585 aa23.93■■□□□ 1.42
HDAC2-207ENST00000520170 GPATCH3Q96I76 525 aa23.93■■□□□ 1.42
HDAC2-207ENST00000520170 CTDP1Q9Y5B0 961 aaPredicted RBP23.93■■□□□ 1.42
HDAC2-207ENST00000520170 PRUNE2Q8WUY3 3088 aa23.92■■□□□ 1.42
HDAC2-207ENST00000520170 RNF113AO15541 343 aaKnown RBP23.92■■□□□ 1.42
HDAC2-207ENST00000520170 APPP05067 770 aa23.92■■□□□ 1.42
HDAC2-207ENST00000520170 ITGB8P26012 769 aa23.92■■□□□ 1.42
HDAC2-207ENST00000520170 TDO2P48775 406 aa23.92■■□□□ 1.42
HDAC2-207ENST00000520170 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.92■■□□□ 1.42
HDAC2-207ENST00000520170 ZNF444Q8N0Y2 327 aaPredicted RBP23.92■■□□□ 1.42
HDAC2-207ENST00000520170 KIFC2Q96AC6 838 aa23.92■■□□□ 1.42
HDAC2-207ENST00000520170 SEMA6BQ9H3T3 888 aa23.92■■□□□ 1.42
HDAC2-207ENST00000520170 ROBO3Q96MS0 1386 aa23.91■■□□□ 1.42
HDAC2-207ENST00000520170 GPAA1O43292 621 aa23.91■■□□□ 1.42
HDAC2-207ENST00000520170 ZBED4O75132 1171 aa23.91■■□□□ 1.42
HDAC2-207ENST00000520170 ADAMTS4O75173 837 aa23.91■■□□□ 1.42
HDAC2-207ENST00000520170 PRDM1O75626 825 aa23.91■■□□□ 1.42
HDAC2-207ENST00000520170 SNAI1O95863 264 aaPredicted RBP23.91■■□□□ 1.42
HDAC2-207ENST00000520170 RAG1P15918 1043 aa23.91■■□□□ 1.42
HDAC2-207ENST00000520170 MSL3Q8N5Y2 521 aaKnown RBP23.91■■□□□ 1.42
HDAC2-207ENST00000520170 CDX2Q99626 313 aaPredicted RBP23.91■■□□□ 1.42
HDAC2-207ENST00000520170 EPB41L4AQ9HCS5 686 aaPredicted RBP23.91■■□□□ 1.42
HDAC2-207ENST00000520170 ZHX1Q9UKY1 873 aaPredicted RBP23.91■■□□□ 1.42
HDAC2-207ENST00000520170 FAM184BQ9ULE4 1060 aa23.91■■□□□ 1.42
HDAC2-207ENST00000520170 DNAJC25-GNG10A0A024R161 153 aa23.9■■□□□ 1.42
HDAC2-207ENST00000520170 ACLYP53396 1101 aa23.9■■□□□ 1.42
HDAC2-207ENST00000520170 SMAD3P84022 425 aaKnown RBP23.9■■□□□ 1.42
HDAC2-207ENST00000520170 TSEN34Q9BSV6 310 aaKnown RBP23.9■■□□□ 1.42
HDAC2-207ENST00000520170 RAVER2Q9HCJ3 691 aaKnown RBP23.9■■□□□ 1.42
HDAC2-207ENST00000520170 TMEM39AQ9NV64 488 aa23.9■■□□□ 1.42
HDAC2-207ENST00000520170 SYNGAP1Q96PV0 1343 aa23.89■■□□□ 1.42
HDAC2-207ENST00000520170 SYNRGQ9UMZ2 1314 aa23.89■■□□□ 1.42
HDAC2-207ENST00000520170 IGKV6D-41A0A0C4DH26 115 aa23.89■■□□□ 1.41
HDAC2-207ENST00000520170 M0R2C6 588 aa23.89■■□□□ 1.41
HDAC2-207ENST00000520170 KIAA0355O15063 1070 aa23.89■■□□□ 1.41
HDAC2-207ENST00000520170 ZFYP08048 801 aaPredicted RBP23.89■■□□□ 1.41
HDAC2-207ENST00000520170 GNAT2P19087 354 aa23.89■■□□□ 1.41
HDAC2-207ENST00000520170 EPHB4P54760 987 aa23.89■■□□□ 1.41
HDAC2-207ENST00000520170 CEP95Q96GE4 821 aa23.89■■□□□ 1.41
HDAC2-207ENST00000520170 RNPC3Q96LT9 517 aaKnown RBP23.89■■□□□ 1.41
HDAC2-207ENST00000520170 DCTPP1Q9H773 170 aa23.89■■□□□ 1.41
HDAC2-207ENST00000520170 ZNF287Q9HBT7 754 aa23.89■■□□□ 1.41
HDAC2-207ENST00000520170 STARD7Q9NQZ5 370 aa23.89■■□□□ 1.41
HDAC2-207ENST00000520170 ATP2A1O14983 1001 aa23.88■■□□□ 1.41
HDAC2-207ENST00000520170 KCNA10Q16322 511 aa23.88■■□□□ 1.41
HDAC2-207ENST00000520170 MAMDC4Q6UXC1 1216 aa23.88■■□□□ 1.41
HDAC2-207ENST00000520170 LRRC47Q8N1G4 583 aaKnown RBP23.88■■□□□ 1.41
HDAC2-207ENST00000520170 ANKRD35Q8N283 1001 aa23.88■■□□□ 1.41
HDAC2-207ENST00000520170 NUP133Q8WUM0 1156 aa23.88■■□□□ 1.41
HDAC2-207ENST00000520170 COL25A1Q9BXS0 654 aaPredicted RBP23.88■■□□□ 1.41
HDAC2-207ENST00000520170 MTMR4Q9NYA4 1195 aa23.88■■□□□ 1.41
HDAC2-207ENST00000520170 FEM1BQ9UK73 627 aa23.88■■□□□ 1.41
HDAC2-207ENST00000520170 DCDC2CA8MYV0 355 aa23.87■■□□□ 1.41
HDAC2-207ENST00000520170 FAAP100Q0VG06 881 aa23.87■■□□□ 1.41
HDAC2-207ENST00000520170 KLHDC9Q8NEP7 349 aa23.87■■□□□ 1.41
HDAC2-207ENST00000520170 MKL1Q969V6 931 aa23.87■■□□□ 1.41
HDAC2-207ENST00000520170 TTYH1Q9H313 450 aaPredicted RBP23.87■■□□□ 1.41
HDAC2-207ENST00000520170 SLC38A10Q9HBR0 1119 aa23.87■■□□□ 1.41
HDAC2-207ENST00000520170 MYADML2A6NDP7 307 aa23.86■■□□□ 1.41
HDAC2-207ENST00000520170 PATL2C9JE40 543 aaKnown RBP23.86■■□□□ 1.41
HDAC2-207ENST00000520170 DUSP11O75319 330 aaKnown RBP23.86■■□□□ 1.41
HDAC2-207ENST00000520170 TTLL1O95922 423 aa23.86■■□□□ 1.41
HDAC2-207ENST00000520170 IRX5P78411 483 aaPredicted RBP23.86■■□□□ 1.41
HDAC2-207ENST00000520170 FPGSQ05932 587 aa23.86■■□□□ 1.41
HDAC2-207ENST00000520170 ACVR2BQ13705 512 aa23.86■■□□□ 1.41
HDAC2-207ENST00000520170 ANKRD33Q7Z3H0 272 aa23.86■■□□□ 1.41
HDAC2-207ENST00000520170 ZNF467Q7Z7K2 595 aaPredicted RBP23.86■■□□□ 1.41
HDAC2-207ENST00000520170 IFNL3Q8IZI9 196 aa23.86■■□□□ 1.41
HDAC2-207ENST00000520170 MYLIPQ8WY64 445 aa23.86■■□□□ 1.41
HDAC2-207ENST00000520170 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.86■■□□□ 1.41
HDAC2-207ENST00000520170 ISY1Q9ULR0 285 aaKnown RBP23.86■■□□□ 1.41
HDAC2-207ENST00000520170 MOXD2PA6NHM9 499 aa23.85■■□□□ 1.41
HDAC2-207ENST00000520170 MAFAQ8NHW3 353 aaPredicted RBP23.85■■□□□ 1.41
HDAC2-207ENST00000520170 TOX2Q96NM4 488 aa23.85■■□□□ 1.41
HDAC2-207ENST00000520170 SEC62Q99442 399 aaKnown RBP23.85■■□□□ 1.41
HDAC2-207ENST00000520170 HOMER2Q9NSB8 354 aa23.85■■□□□ 1.41
HDAC2-207ENST00000520170 CDH23Q9H251 3354 aa23.85■■□□□ 1.41
HDAC2-207ENST00000520170 C6orf222P0C671 652 aaPredicted RBP23.84■■□□□ 1.41
HDAC2-207ENST00000520170 TSPY3P0CV98 308 aa23.84■■□□□ 1.41
HDAC2-207ENST00000520170 TSPY8P0CW00 308 aa23.84■■□□□ 1.41
HDAC2-207ENST00000520170 LRRFIP1Q32MZ4 808 aaKnown RBP23.84■■□□□ 1.41
HDAC2-207ENST00000520170 CCDC144BQ3MJ40 725 aa23.84■■□□□ 1.41
HDAC2-207ENST00000520170 SLFN13Q68D06 897 aa23.84■■□□□ 1.41
HDAC2-207ENST00000520170 CCSAPQ6IQ19 270 aaPredicted RBP23.84■■□□□ 1.41
HDAC2-207ENST00000520170 GMCL1P1Q8NEA9 526 aa23.84■■□□□ 1.41
HDAC2-207ENST00000520170 CHST13Q8NET6 341 aa23.84■■□□□ 1.41
HDAC2-207ENST00000520170 VTI1AQ96AJ9 217 aa23.84■■□□□ 1.41
HDAC2-207ENST00000520170 CHMP4CQ96CF2 233 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms