RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 TP53I13Q8NBR0 393 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-209ENST00000519485 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.5□□□□□ -1.53
CSMD3-209ENST00000519485 KLHL3Q9UH77 587 aa5.5□□□□□ -1.53
CSMD3-209ENST00000519485 IRS2Q9Y4H2 1338 aa5.49□□□□□ -1.53
CSMD3-209ENST00000519485 UBOX5O94941 541 aa5.49□□□□□ -1.53
CSMD3-209ENST00000519485 PF4P02776 101 aa5.49□□□□□ -1.53
CSMD3-209ENST00000519485 GBP1P32455 592 aa5.49□□□□□ -1.53
CSMD3-209ENST00000519485 DAB2P98082 770 aa5.49□□□□□ -1.53
CSMD3-209ENST00000519485 RAD51AP2Q09MP3 1159 aa5.49□□□□□ -1.53
CSMD3-209ENST00000519485 HSF5Q4G112 596 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-209ENST00000519485 NBPF12Q5TAG4 269 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-209ENST00000519485 SYT8Q8NBV8 401 aa5.49□□□□□ -1.53
CSMD3-209ENST00000519485 TNFRSF12AQ9NP84 129 aa5.49□□□□□ -1.53
CSMD3-209ENST00000519485 RNF19AQ9NV58 838 aa5.49□□□□□ -1.53
CSMD3-209ENST00000519485 A0A1W2PQ45 241 aaPredicted RBP5.48□□□□□ -1.53
CSMD3-209ENST00000519485 A0A1W2PQY0 241 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 SSU72P8A0A1W2PR75 194 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 SIGLEC6O43699 453 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 SYPP08247 313 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 CTSHP09668 335 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 IGFBP6P24592 240 aaPredicted RBP5.48□□□□□ -1.53
CSMD3-209ENST00000519485 CHMP4BP1P59074 171 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 REC114Q7Z4M0 266 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 TMC3Q7Z5M5 1100 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 SLCO6A1Q86UG4 719 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 PWWP2AQ96N64 755 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 RSRP1Q9BUV0 290 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 TMPRSS5Q9H3S3 457 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 ACSL6Q9UKU0 697 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 TAF6LQ9Y6J9 622 aa5.48□□□□□ -1.53
CSMD3-209ENST00000519485 SDHBP21912 280 aa5.47□□□□□ -1.53
CSMD3-209ENST00000519485 PWP1Q13610 501 aa5.47□□□□□ -1.53
CSMD3-209ENST00000519485 MLECQ14165 292 aa5.47□□□□□ -1.53
CSMD3-209ENST00000519485 VMACQ2NL98 169 aa5.47□□□□□ -1.53
CSMD3-209ENST00000519485 TMC6Q7Z403 805 aa5.47□□□□□ -1.53
CSMD3-209ENST00000519485 ZDHHC14Q8IZN3 488 aa5.47□□□□□ -1.53
CSMD3-209ENST00000519485 TMEM74Q96NL1 305 aa5.47□□□□□ -1.53
CSMD3-209ENST00000519485 ADAM7Q9H2U9 754 aa5.47□□□□□ -1.53
CSMD3-209ENST00000519485 MYRFQ9Y2G1 1151 aa5.47□□□□□ -1.53
CSMD3-209ENST00000519485 FFAR3O14843 346 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 GRIN3BO60391 1043 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 ATE1O95260 518 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 PRAMEF1O95521 474 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 CCNFP41002 786 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 CEBPAP49715 358 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-209ENST00000519485 RAB3GAP1Q15042 981 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 CDCP2Q5VXM1 449 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 NLGN1Q8N2Q7 840 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 LRRC3Q9BY71 257 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 KCNQ5Q9NR82 932 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 ERVK13-1Q9NX77 482 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 PRR13Q9NZ81 148 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 GMIPQ9P107 970 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 PARP2Q9UGN5 583 aa5.46□□□□□ -1.54
CSMD3-209ENST00000519485 ROBO2Q9HCK4 1378 aa5.45□□□□□ -1.54
CSMD3-209ENST00000519485 BUB1BO60566 1050 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-209ENST00000519485 ZNF205O95201 554 aa5.45□□□□□ -1.54
CSMD3-209ENST00000519485 BMP8BP34820 402 aa5.45□□□□□ -1.54
CSMD3-209ENST00000519485 KCNC1P48547 511 aa5.45□□□□□ -1.54
CSMD3-209ENST00000519485 MAPKAPK2P49137 400 aa5.45□□□□□ -1.54
CSMD3-209ENST00000519485 SLURP1P55000 103 aa5.45□□□□□ -1.54
CSMD3-209ENST00000519485 CYP4F8P98187 520 aa5.45□□□□□ -1.54
CSMD3-209ENST00000519485 PLP2Q04941 152 aa5.45□□□□□ -1.54
CSMD3-209ENST00000519485 SNW1Q13573 536 aaKnown RBP5.45□□□□□ -1.54
CSMD3-209ENST00000519485 EAPPQ56P03 285 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-209ENST00000519485 ZPBP2Q6X784 338 aa5.45□□□□□ -1.54
CSMD3-209ENST00000519485 TMC4Q7Z404 712 aa5.45□□□□□ -1.54
CSMD3-209ENST00000519485 CRELD1Q96HD1 420 aa5.45□□□□□ -1.54
CSMD3-209ENST00000519485 EAF1Q96JC9 268 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-209ENST00000519485 GPR55Q9Y2T6 319 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-209ENST00000519485 FKTNO75072 461 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 RAG1P15918 1043 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 PRKCAP17252 672 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 GARTP22102 1010 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 PSMD2Q13200 908 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 NR1I3Q14994 352 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 RTP5Q14D33 572 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 RPTNQ6XPR3 784 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 FAM196AQ6ZSG2 479 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 SND1Q7KZF4 910 aaKnown RBP eCLIP5.44□□□□□ -1.54
CSMD3-209ENST00000519485 RELL1Q8IUW5 271 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 BDH2Q9BUT1 245 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 PRDM14Q9GZV8 571 aa5.44□□□□□ -1.54
CSMD3-209ENST00000519485 PRICKLE3O43900 615 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-209ENST00000519485 FBLN1P23142 703 aa5.43□□□□□ -1.54
CSMD3-209ENST00000519485 ZEB1P37275 1124 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-209ENST00000519485 KIR3DS1Q14943 382 aa5.43□□□□□ -1.54
CSMD3-209ENST00000519485 PLEKHN1Q494U1 663 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-209ENST00000519485 ARSHQ5FYA8 562 aa5.43□□□□□ -1.54
CSMD3-209ENST00000519485 HHIPL2Q6UWX4 724 aa5.43□□□□□ -1.54
CSMD3-209ENST00000519485 CNNM2Q9H8M5 875 aa5.43□□□□□ -1.54
CSMD3-209ENST00000519485 CHST7Q9NS84 486 aa5.43□□□□□ -1.54
CSMD3-209ENST00000519485 PFKLP17858 780 aa5.42□□□□□ -1.54
CSMD3-209ENST00000519485 GBP2P32456 591 aaPredicted RBP5.42□□□□□ -1.54
CSMD3-209ENST00000519485 TARBP2Q15633 366 aaKnown RBP5.42□□□□□ -1.54
CSMD3-209ENST00000519485 CWF19L2Q2TBE0 894 aaKnown RBP5.42□□□□□ -1.54
CSMD3-209ENST00000519485 VWA3BQ502W6 1294 aa5.42□□□□□ -1.54
CSMD3-209ENST00000519485 SNAP47Q5SQN1 464 aa5.42□□□□□ -1.54
CSMD3-209ENST00000519485 ZC3H14Q6PJT7 736 aaKnown RBP5.42□□□□□ -1.54
CSMD3-209ENST00000519485 GOLM1Q8NBJ4 401 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms