RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 TRIM43Q96BQ3 446 aaPredicted RBP16.37■□□□□ 0.21
VDAC3-204ENST00000519072 SLF1Q9BQI6 1058 aa16.37■□□□□ 0.21
VDAC3-204ENST00000519072 TEX13BQ9BXU2 312 aa16.37■□□□□ 0.21
VDAC3-204ENST00000519072 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
VDAC3-204ENST00000519072 MCM3APO60318 1980 aa16.37■□□□□ 0.21
VDAC3-204ENST00000519072 PGK1P00558 417 aa16.36■□□□□ 0.21
VDAC3-204ENST00000519072 PIP4P2Q8N4L2 257 aa16.36■□□□□ 0.21
VDAC3-204ENST00000519072 KBTBD3Q8NAB2 608 aa16.36■□□□□ 0.21
VDAC3-204ENST00000519072 FAM161BQ96MY7 647 aa16.36■□□□□ 0.21
VDAC3-204ENST00000519072 MKNK2Q9HBH9 465 aa16.36■□□□□ 0.21
VDAC3-204ENST00000519072 CNPY2Q9Y2B0 182 aa16.36■□□□□ 0.21
VDAC3-204ENST00000519072 TACC3Q9Y6A5 838 aa16.36■□□□□ 0.21
VDAC3-204ENST00000519072 PRUNE2Q8WUY3 3088 aa16.35■□□□□ 0.21
VDAC3-204ENST00000519072 A0A1W2PQ45 241 aaPredicted RBP16.35■□□□□ 0.21
VDAC3-204ENST00000519072 A0A1W2PQY0 241 aa16.35■□□□□ 0.21
VDAC3-204ENST00000519072 F5H6K3 240 aa16.35■□□□□ 0.21
VDAC3-204ENST00000519072 ADAMTS4O75173 837 aa16.35■□□□□ 0.21
VDAC3-204ENST00000519072 NDUFB10O96000 172 aa16.35■□□□□ 0.21
VDAC3-204ENST00000519072 CLTBP09497 229 aa16.35■□□□□ 0.21
VDAC3-204ENST00000519072 KLRC3Q07444 240 aa16.35■□□□□ 0.21
VDAC3-204ENST00000519072 SNRNP48Q6IEG0 339 aaKnown RBP16.35■□□□□ 0.21
VDAC3-204ENST00000519072 PRPF38AQ8NAV1 312 aaKnown RBP16.35■□□□□ 0.21
VDAC3-204ENST00000519072 APPBP2Q92624 585 aa16.35■□□□□ 0.21
VDAC3-204ENST00000519072 OSBP2Q969R2 916 aa16.35■□□□□ 0.21
VDAC3-204ENST00000519072 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
VDAC3-204ENST00000519072 SYNGAP1Q96PV0 1343 aa16.35■□□□□ 0.21
VDAC3-204ENST00000519072 VCANP13611 3396 aa16.34■□□□□ 0.21
VDAC3-204ENST00000519072 IGKV6D-41A0A0C4DH26 115 aa16.34■□□□□ 0.21
VDAC3-204ENST00000519072 MINDY4BA8MYZ0 360 aa16.34■□□□□ 0.21
VDAC3-204ENST00000519072 ATP2A1O14983 1001 aa16.34■□□□□ 0.21
VDAC3-204ENST00000519072 KIAA0355O15063 1070 aa16.34■□□□□ 0.21
VDAC3-204ENST00000519072 ITGB8P26012 769 aa16.34■□□□□ 0.21
VDAC3-204ENST00000519072 SMAD3P84022 425 aaKnown RBP16.34■□□□□ 0.21
VDAC3-204ENST00000519072 C20orf194Q5TEA3 1177 aa16.34■□□□□ 0.21
VDAC3-204ENST00000519072 MAMDC4Q6UXC1 1216 aa16.34■□□□□ 0.21
VDAC3-204ENST00000519072 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.34■□□□□ 0.21
VDAC3-204ENST00000519072 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.34■□□□□ 0.21
VDAC3-204ENST00000519072 TSEN34Q9BSV6 310 aaKnown RBP16.34■□□□□ 0.21
VDAC3-204ENST00000519072 RIPK3Q9Y572 518 aa16.34■□□□□ 0.21
VDAC3-204ENST00000519072 DNAJC25-GNG10A0A024R161 153 aa16.33■□□□□ 0.2
VDAC3-204ENST00000519072 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.2
VDAC3-204ENST00000519072 GPAA1O43292 621 aa16.33■□□□□ 0.2
VDAC3-204ENST00000519072 ZFYP08048 801 aaPredicted RBP16.33■□□□□ 0.2
VDAC3-204ENST00000519072 ZNF467Q7Z7K2 595 aaPredicted RBP16.33■□□□□ 0.2
VDAC3-204ENST00000519072 STK11IPQ8N1F8 1099 aa16.33■□□□□ 0.2
VDAC3-204ENST00000519072 MKL1Q969V6 931 aa16.33■□□□□ 0.2
VDAC3-204ENST00000519072 LENG1Q96BZ8 264 aaPredicted RBP16.33■□□□□ 0.2
VDAC3-204ENST00000519072 DDX11Q96FC9 970 aa16.33■□□□□ 0.2
VDAC3-204ENST00000519072 GPATCH3Q96I76 525 aa16.33■□□□□ 0.2
VDAC3-204ENST00000519072 TOX2Q96NM4 488 aa16.33■□□□□ 0.2
VDAC3-204ENST00000519072 SEMA6BQ9H3T3 888 aa16.33■□□□□ 0.2
VDAC3-204ENST00000519072 EPB41L4AQ9HCS5 686 aaPredicted RBP16.33■□□□□ 0.2
VDAC3-204ENST00000519072 CLIP2Q9UDT6 1046 aa16.33■□□□□ 0.2
VDAC3-204ENST00000519072 SYNRGQ9UMZ2 1314 aa16.33■□□□□ 0.2
VDAC3-204ENST00000519072 MOXD2PA6NHM9 499 aa16.32■□□□□ 0.2
VDAC3-204ENST00000519072 PQBP1O60828 265 aaKnown RBP16.32■□□□□ 0.2
VDAC3-204ENST00000519072 ZBED4O75132 1171 aa16.32■□□□□ 0.2
VDAC3-204ENST00000519072 SNAI1O95863 264 aaPredicted RBP16.32■□□□□ 0.2
VDAC3-204ENST00000519072 GNAT2P19087 354 aa16.32■□□□□ 0.2
VDAC3-204ENST00000519072 ACLYP53396 1101 aa16.32■□□□□ 0.2
VDAC3-204ENST00000519072 ANKRD33Q7Z3H0 272 aa16.32■□□□□ 0.2
VDAC3-204ENST00000519072 KLHDC9Q8NEP7 349 aa16.32■□□□□ 0.2
VDAC3-204ENST00000519072 CDX2Q99626 313 aaPredicted RBP16.32■□□□□ 0.2
VDAC3-204ENST00000519072 DCTPP1Q9H773 170 aa16.32■□□□□ 0.2
VDAC3-204ENST00000519072 ZNF287Q9HBT7 754 aa16.32■□□□□ 0.2
VDAC3-204ENST00000519072 FAM184BQ9ULE4 1060 aa16.32■□□□□ 0.2
VDAC3-204ENST00000519072 SYNPO2Q9UMS6 1093 aa16.32■□□□□ 0.2
VDAC3-204ENST00000519072 SSUH2Q9Y2M2 353 aa16.32■□□□□ 0.2
VDAC3-204ENST00000519072 DUSP11O75319 330 aaKnown RBP16.31■□□□□ 0.2
VDAC3-204ENST00000519072 RAG1P15918 1043 aa16.31■□□□□ 0.2
VDAC3-204ENST00000519072 TDO2P48775 406 aa16.31■□□□□ 0.2
VDAC3-204ENST00000519072 CCSAPQ6IQ19 270 aaPredicted RBP16.31■□□□□ 0.2
VDAC3-204ENST00000519072 ZNF444Q8N0Y2 327 aaPredicted RBP16.31■□□□□ 0.2
VDAC3-204ENST00000519072 CPXCR1Q8N123 301 aa16.31■□□□□ 0.2
VDAC3-204ENST00000519072 NUP133Q8WUM0 1156 aa16.31■□□□□ 0.2
VDAC3-204ENST00000519072 COL25A1Q9BXS0 654 aaPredicted RBP16.31■□□□□ 0.2
VDAC3-204ENST00000519072 SLC38A10Q9HBR0 1119 aa16.31■□□□□ 0.2
VDAC3-204ENST00000519072 STARD7Q9NQZ5 370 aa16.31■□□□□ 0.2
VDAC3-204ENST00000519072 TMEM39AQ9NV64 488 aa16.31■□□□□ 0.2
VDAC3-204ENST00000519072 MTMR4Q9NYA4 1195 aa16.31■□□□□ 0.2
VDAC3-204ENST00000519072 FEM1BQ9UK73 627 aa16.31■□□□□ 0.2
VDAC3-204ENST00000519072 ZHX1Q9UKY1 873 aaPredicted RBP16.31■□□□□ 0.2
VDAC3-204ENST00000519072 CTDP1Q9Y5B0 961 aaPredicted RBP16.31■□□□□ 0.2
VDAC3-204ENST00000519072 PLIN4Q96Q06 1357 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 M0R2C6 588 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 PRDM1O75626 825 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 OAZ1P54368 228 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 EPHB4P54760 987 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 FAAP100Q0VG06 881 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 TSHZ3Q63HK5 1081 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 GMCL1P1Q8NEA9 526 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 CHST13Q8NET6 341 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 KIFC2Q96AC6 838 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 CEP95Q96GE4 821 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 RNPC3Q96LT9 517 aaKnown RBP16.3■□□□□ 0.2
VDAC3-204ENST00000519072 TTYH1Q9H313 450 aaPredicted RBP16.3■□□□□ 0.2
VDAC3-204ENST00000519072 RAVER2Q9HCJ3 691 aaKnown RBP16.3■□□□□ 0.2
VDAC3-204ENST00000519072 FBXO40Q9UH90 709 aa16.3■□□□□ 0.2
VDAC3-204ENST00000519072 SPTBN5Q9NRC6 3674 aaKnown RBP16.3■□□□□ 0.2
VDAC3-204ENST00000519072 TMEM265A0A087WTH1 108 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms