RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 UIMC1Q96RL1 719 aa11.33□□□□□ -0.6
MTCL1-207ENST00000518815 NUP88Q99567 741 aaPredicted RBP11.33□□□□□ -0.6
MTCL1-207ENST00000518815 N4BP3O15049 544 aa11.33□□□□□ -0.6
MTCL1-207ENST00000518815 GTPBP6O43824 516 aaPredicted RBP11.33□□□□□ -0.6
MTCL1-207ENST00000518815 PARP1P09874 1014 aaKnown RBP11.33□□□□□ -0.6
MTCL1-207ENST00000518815 CCDC175P0C221 793 aa11.33□□□□□ -0.6
MTCL1-207ENST00000518815 SCNN1DP51172 638 aa11.33□□□□□ -0.6
MTCL1-207ENST00000518815 DMTNQ08495 405 aa11.33□□□□□ -0.6
MTCL1-207ENST00000518815 TNIP1Q15025 636 aa11.33□□□□□ -0.6
MTCL1-207ENST00000518815 ZYXQ15942 572 aaKnown RBP11.33□□□□□ -0.6
MTCL1-207ENST00000518815 NT5DC1Q5TFE4 455 aa11.33□□□□□ -0.6
MTCL1-207ENST00000518815 SYMPKQ92797 1274 aaKnown RBP11.33□□□□□ -0.6
MTCL1-207ENST00000518815 TTF2Q9UNY4 1162 aaKnown RBP11.33□□□□□ -0.6
MTCL1-207ENST00000518815 XDHP47989 1333 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 LAD1O00515 517 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 KIF5CO60282 957 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 ATP1A3P13637 1013 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 GNA11P29992 359 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 AMPD3Q01432 767 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 PFKFB3Q16875 520 aaPredicted RBP11.32□□□□□ -0.6
MTCL1-207ENST00000518815 ODF2Q5BJF6 829 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 ARMCX5Q6P1M9 558 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 MYL1P05976 194 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 FGRP09769 529 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 TOB1P50616 345 aaPredicted RBP11.32□□□□□ -0.6
MTCL1-207ENST00000518815 TUBB2AQ13885 445 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 TCERG1LQ5VWI1 586 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 KIAA1328Q86T90 577 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 AMIGO3Q86WK7 504 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 KIAA0825Q8IV33 1275 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 LARGE2Q8N3Y3 721 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 TRIM47Q96LD4 638 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 TUBB2BQ9BVA1 445 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 MYH15Q9Y2K3 1946 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 KIF20AO95235 890 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 PLEKHA8P1O95397 391 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 SERPINB2P05120 415 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 PTGDRQ13258 359 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 CACNA2D4Q7Z3S7 1137 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 OXER1Q8TDS5 423 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 TIAM2Q8IVF5 1701 aa11.32□□□□□ -0.6
MTCL1-207ENST00000518815 ATP2B4P23634 1241 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 POLD1P28340 1107 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 TROAPQ12815 778 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 GRAPQ13588 217 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 TAF3Q5VWG9 929 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 WWC2Q6AWC2 1192 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 TMC4Q7Z404 712 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 GRAPLQ8TC17 118 aaPredicted RBP11.31□□□□□ -0.6
MTCL1-207ENST00000518815 GPR101Q96P66 508 aaPredicted RBP11.31□□□□□ -0.6
MTCL1-207ENST00000518815 MAGEF1Q9HAY2 307 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 CALCOCO1Q9P1Z2 691 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 AKAP11Q9UKA4 1901 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 MATR3P43243 847 aaKnown RBP eCLIP11.31□□□□□ -0.6
MTCL1-207ENST00000518815 GNG11P61952 73 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 ASIC1P78348 528 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 ATP2C1P98194 919 aaPredicted RBP11.31□□□□□ -0.6
MTCL1-207ENST00000518815 FKBP15Q5T1M5 1219 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 CCDC125Q86Z20 511 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 FAM114A1Q8IWE2 563 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 PAGE5Q96GU1 130 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.31□□□□□ -0.6
MTCL1-207ENST00000518815 BAG6P46379 1132 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 KRT25Q7Z3Z0 450 aa11.31□□□□□ -0.6
MTCL1-207ENST00000518815 NRXN2Q9P2S2 1712 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 A0A1B0GUL6 1792 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 CYP2D7A0A087X1C5 515 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 ACTN4O43707 911 aaKnown RBP11.3□□□□□ -0.6
MTCL1-207ENST00000518815 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
MTCL1-207ENST00000518815 PAK1Q13153 545 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 BMS1Q14692 1282 aaKnown RBP11.3□□□□□ -0.6
MTCL1-207ENST00000518815 JAKMIP3Q5VZ66 844 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 IGSF22Q8N9C0 903 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 STAMQ92783 540 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 TSG101Q99816 390 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 ZNF215Q9UL58 517 aaPredicted RBP11.3□□□□□ -0.6
MTCL1-207ENST00000518815 PSMA7O14818 248 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 IBSPP21815 317 aaPredicted RBP11.3□□□□□ -0.6
MTCL1-207ENST00000518815 DNA2P51530 1060 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 PRR5LQ6MZQ0 368 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 LRRC27Q9C0I9 530 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 CUEDC2Q9H467 287 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 CNTNAP5Q8WYK1 1306 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 SARSP49591 514 aaKnown RBP11.3□□□□□ -0.6
MTCL1-207ENST00000518815 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 E4F1Q66K89 784 aaPredicted RBP11.3□□□□□ -0.6
MTCL1-207ENST00000518815 LEKR1Q6ZMV7 388 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 ADGRA1Q86SQ6 560 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 CCDC102AQ96A19 550 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 PANX2Q96RD6 677 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 EXOC1Q9NV70 894 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 USP40Q9NVE5 1235 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 PPP2R2CQ9Y2T4 447 aa11.3□□□□□ -0.6
MTCL1-207ENST00000518815 POTEB2H3BUK9 544 aa11.29□□□□□ -0.6
MTCL1-207ENST00000518815 TRMT44Q8IYL2 757 aaKnown RBP11.29□□□□□ -0.6
MTCL1-207ENST00000518815 CAMKK2Q96RR4 588 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms