RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 SDSP20132 328 aa14.69□□□□□ -0.06
VEGFA-218ENST00000518689 NOVP48745 357 aa14.69□□□□□ -0.06
VEGFA-218ENST00000518689 SLFN13Q68D06 897 aa14.69□□□□□ -0.06
VEGFA-218ENST00000518689 PRO3102Q9H379 93 aa14.69□□□□□ -0.06
VEGFA-218ENST00000518689 C11orf49Q9H6J7 331 aa14.69□□□□□ -0.06
VEGFA-218ENST00000518689 DDX20Q9UHI6 824 aaKnown RBP14.69□□□□□ -0.06
VEGFA-218ENST00000518689 ZMYM6O95789 1325 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 CCDC171Q6TFL3 1326 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 ATP2A1O14983 1001 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 PGK2P07205 417 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 CNGA1P29973 690 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 ZNF792Q3KQV3 632 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 PRAMEF19Q5SWL8 479 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 CHRDL2Q6WN34 429 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 GMCL1Q96IK5 515 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 MMP19Q99542 508 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 TEX13BQ9BXU2 312 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 SLC38A10Q9HBR0 1119 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 SLC5A4Q9NY91 659 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 FEM1BQ9UK73 627 aa14.68□□□□□ -0.06
VEGFA-218ENST00000518689 TSPY2A6NKD2 308 aa14.67□□□□□ -0.06
VEGFA-218ENST00000518689 RANBP6O60518 1105 aaKnown RBP14.67□□□□□ -0.06
VEGFA-218ENST00000518689 MSCO60682 206 aa14.67□□□□□ -0.06
VEGFA-218ENST00000518689 BMP3P12645 472 aa14.67□□□□□ -0.06
VEGFA-218ENST00000518689 COPB2P35606 906 aa14.67□□□□□ -0.06
VEGFA-218ENST00000518689 SNRNP48Q6IEG0 339 aaKnown RBP14.67□□□□□ -0.06
VEGFA-218ENST00000518689 KIFC2Q96AC6 838 aa14.67□□□□□ -0.06
VEGFA-218ENST00000518689 RBM27Q9P2N5 1060 aaKnown RBP14.67□□□□□ -0.06
VEGFA-218ENST00000518689 DIS3Q9Y2L1 958 aaKnown RBP14.67□□□□□ -0.06
VEGFA-218ENST00000518689 DNAJC25-GNG10A0A024R161 153 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 TMEM232C9JQI7 657 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 SEPT4O43236 478 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 ZBED4O75132 1171 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 MCCP23508 829 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 PDE4AP27815 886 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 FXR1P51114 621 aaKnown RBP eCLIP14.66□□□□□ -0.06
VEGFA-218ENST00000518689 KCTD2Q14681 263 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.66□□□□□ -0.065e-6■□□□□ 9.9
VEGFA-218ENST00000518689 RASGRP2Q7LDG7 609 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 CPXCR1Q8N123 301 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 RAVER2Q9HCJ3 691 aaKnown RBP14.66□□□□□ -0.06
VEGFA-218ENST00000518689 STX8Q9UNK0 236 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 LCTP09848 1927 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 SZT2Q5T011 3432 aa14.66□□□□□ -0.06
VEGFA-218ENST00000518689 PLA2G6O60733 806 aa14.65□□□□□ -0.06
VEGFA-218ENST00000518689 HAND2P61296 217 aa14.65□□□□□ -0.06
VEGFA-218ENST00000518689 IRX6P78412 446 aaPredicted RBP14.65□□□□□ -0.06
VEGFA-218ENST00000518689 LRRC26Q2I0M4 334 aa14.65□□□□□ -0.06
VEGFA-218ENST00000518689 PPP4R3BQ5MIZ7 849 aa14.65□□□□□ -0.06
VEGFA-218ENST00000518689 ANO1Q5XXA6 986 aa14.65□□□□□ -0.06
VEGFA-218ENST00000518689 RCSD1Q6JBY9 416 aa14.65□□□□□ -0.06
VEGFA-218ENST00000518689 C7orf61Q8IZ16 206 aa14.65□□□□□ -0.06
VEGFA-218ENST00000518689 CHMP4CQ96CF2 233 aa14.65□□□□□ -0.06
VEGFA-218ENST00000518689 TINF2Q9BSI4 451 aa14.65□□□□□ -0.06
VEGFA-218ENST00000518689 LAMA2P24043 3122 aaKnown RBP14.64□□□□□ -0.07
VEGFA-218ENST00000518689 TAL1P17542 331 aaPredicted RBP14.64□□□□□ -0.07
VEGFA-218ENST00000518689 SLC1A4P43007 532 aa14.64□□□□□ -0.07
VEGFA-218ENST00000518689 STAT2P52630 851 aa14.64□□□□□ -0.07
VEGFA-218ENST00000518689 OAZ1P54368 228 aa14.64□□□□□ -0.07
VEGFA-218ENST00000518689 CWC27Q6UX04 472 aaKnown RBP14.64□□□□□ -0.07
VEGFA-218ENST00000518689 KCTD1Q719H9 257 aa14.64□□□□□ -0.07
VEGFA-218ENST00000518689 TBC1D10CQ8IV04 446 aa14.64□□□□□ -0.07
VEGFA-218ENST00000518689 CHURC1Q8WUH1 139 aa14.64□□□□□ -0.07
VEGFA-218ENST00000518689 STAG1Q8WVM7 1258 aa14.64□□□□□ -0.07
VEGFA-218ENST00000518689 TCP11L1Q9NUJ3 509 aa14.64□□□□□ -0.07
VEGFA-218ENST00000518689 ZNF536O15090 1300 aa14.64□□□□□ -0.07
VEGFA-218ENST00000518689 DNM1LO00429 736 aa14.63□□□□□ -0.07
VEGFA-218ENST00000518689 FDX1P10109 184 aa14.63□□□□□ -0.07
VEGFA-218ENST00000518689 SLC4A3P48751 1232 aa14.63□□□□□ -0.07
VEGFA-218ENST00000518689 MFAP1P55081 439 aaKnown RBP14.63□□□□□ -0.07
VEGFA-218ENST00000518689 RRP12Q5JTH9 1297 aaKnown RBP14.63□□□□□ -0.07
VEGFA-218ENST00000518689 AKNAD1Q5T1N1 836 aa14.63□□□□□ -0.07
VEGFA-218ENST00000518689 FAM160B2Q86V87 743 aa14.63□□□□□ -0.07
VEGFA-218ENST00000518689 FGD4Q96M96 766 aa14.63□□□□□ -0.07
VEGFA-218ENST00000518689 GDF15Q99988 308 aa14.63□□□□□ -0.07
VEGFA-218ENST00000518689 SENP6Q9GZR1 1112 aaPredicted RBP14.63□□□□□ -0.07
VEGFA-218ENST00000518689 TOMM22Q9NS69 142 aa14.63□□□□□ -0.07
VEGFA-218ENST00000518689 NRBP1Q9UHY1 535 aa14.63□□□□□ -0.07
VEGFA-218ENST00000518689 ZMYND8Q9ULU4 1186 aaPredicted RBP14.63□□□□□ -0.07
VEGFA-218ENST00000518689 LAMA3Q16787 3333 aa14.63□□□□□ -0.07
VEGFA-218ENST00000518689 SNAI1O95863 264 aaPredicted RBP14.62□□□□□ -0.07
VEGFA-218ENST00000518689 ZNF865P0CJ78 1059 aaPredicted RBP14.62□□□□□ -0.07
VEGFA-218ENST00000518689 PCP11498 1178 aaKnown RBP14.62□□□□□ -0.07
VEGFA-218ENST00000518689 GJC2Q5T442 439 aaPredicted RBP14.62□□□□□ -0.07
VEGFA-218ENST00000518689 MAMDC4Q6UXC1 1216 aa14.62□□□□□ -0.07
VEGFA-218ENST00000518689 CHST13Q8NET6 341 aa14.62□□□□□ -0.07
VEGFA-218ENST00000518689 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
VEGFA-218ENST00000518689 AGBL1Q96MI9 1066 aa14.62□□□□□ -0.07
VEGFA-218ENST00000518689 TMEM47Q9BQJ4 181 aa14.62□□□□□ -0.07
VEGFA-218ENST00000518689 IL25Q9H293 177 aa14.62□□□□□ -0.07
VEGFA-218ENST00000518689 DIAPH3Q9NSV4 1193 aa14.62□□□□□ -0.07
VEGFA-218ENST00000518689 PRR12Q9ULL5 1215 aa14.62□□□□□ -0.07
VEGFA-218ENST00000518689 CTDP1Q9Y5B0 961 aaPredicted RBP14.62□□□□□ -0.07
VEGFA-218ENST00000518689 HIP1O00291 1037 aa14.61□□□□□ -0.07
VEGFA-218ENST00000518689 TOP1P11387 765 aaKnown RBP14.61□□□□□ -0.07
VEGFA-218ENST00000518689 GSPT1P15170 499 aaKnown RBP14.61□□□□□ -0.07
VEGFA-218ENST00000518689 SYN1P17600 705 aa14.61□□□□□ -0.07
VEGFA-218ENST00000518689 SNAP25P60880 206 aa14.61□□□□□ -0.07
VEGFA-218ENST00000518689 MFSD6Q6ZSS7 791 aa14.61□□□□□ -0.07
VEGFA-218ENST00000518689 ZNF467Q7Z7K2 595 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms