RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 LNPKQ9C0E8 428 aa5.67□□□□□ -1.5
VPS13B-207ENST00000518569 ATP13A1Q9HD20 1204 aa5.67□□□□□ -1.5
VPS13B-207ENST00000518569 FAM86C1Q9NVL1 165 aa5.67□□□□□ -1.5
VPS13B-207ENST00000518569 ANGEL1Q9UNK9 670 aaKnown RBP5.67□□□□□ -1.5
VPS13B-207ENST00000518569 PDPK1O15530 556 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 ADAMTS4O75173 837 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 ESR1P03372 595 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 BNIP3Q12983 259 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 ANGEL2Q5VTE6 544 aaKnown RBP5.66□□□□□ -1.5
VPS13B-207ENST00000518569 RNF111Q6ZNA4 994 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 ADAT2Q7Z6V5 191 aaKnown RBP5.66□□□□□ -1.5
VPS13B-207ENST00000518569 WFDC3Q8IUB2 231 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 ARHGEF39Q8N4T4 335 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 LINC00116Q8NCU8 138 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 TCTN2Q96GX1 697 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 DSCC1Q9BVC3 393 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 DUSP13Q9UII6 198 aa5.66□□□□□ -1.5
VPS13B-207ENST00000518569 SF3B6Q9Y3B4 125 aaKnown RBP5.66□□□□□ -1.5
VPS13B-207ENST00000518569 CD8BP10966 210 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 BMP8BP34820 402 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 GRB10Q13322 594 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 RASA3Q14644 834 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 NFXL1Q6ZNB6 911 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 DPH6Q7L8W6 267 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 SPRED2Q7Z698 418 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 CREG2Q8IUH2 290 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 CRACR2BQ8N4Y2 399 aaPredicted RBP5.65□□□□□ -1.5
VPS13B-207ENST00000518569 FIBCD1Q8N539 461 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 USHBP1Q8N6Y0 703 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 AGBL5Q8NDL9 886 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 BVESQ8NE79 360 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 FLCNQ8NFG4 579 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 SGSM3Q96HU1 749 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 FGD4Q96M96 766 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 DEPDC7Q96QD5 511 aa5.65□□□□□ -1.5
VPS13B-207ENST00000518569 PAK6Q9NQU5 681 aaPredicted RBP5.65□□□□□ -1.5
VPS13B-207ENST00000518569 WASH4PA8MWX3 477 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 AGRPO00253 132 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 NOP56O00567 594 aaKnown RBP5.64□□□□□ -1.51
VPS13B-207ENST00000518569 YBX3P16989 372 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS13B-207ENST00000518569 ENDOUP21128 410 aaKnown RBP5.64□□□□□ -1.51
VPS13B-207ENST00000518569 NOP2P46087 812 aaKnown RBP5.64□□□□□ -1.51
VPS13B-207ENST00000518569 PCBP3P57721 371 aaKnown RBP5.64□□□□□ -1.51
VPS13B-207ENST00000518569 IKZF1Q13422 519 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 CCDC144BQ3MJ40 725 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 SV2CQ496J9 727 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 CWF19L1Q69YN2 538 aaKnown RBP5.64□□□□□ -1.51
VPS13B-207ENST00000518569 POMZP3Q6PJE2 187 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 BRF1Q92994 677 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 SRPK1Q96SB4 655 aaKnown RBP5.64□□□□□ -1.51
VPS13B-207ENST00000518569 NOL6Q9H6R4 1146 aaKnown RBP5.64□□□□□ -1.51
VPS13B-207ENST00000518569 SNTG2Q9NY99 539 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 APEX2Q9UBZ4 518 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 CGGBP1Q9UFW8 167 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-207ENST00000518569 AKT3Q9Y243 479 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 SUGT1Q9Y2Z0 365 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 EMC9Q9Y3B6 208 aa5.64□□□□□ -1.51
VPS13B-207ENST00000518569 IQCA1LA6NCM1 817 aa5.63□□□□□ -1.51
VPS13B-207ENST00000518569 FUT4P22083 530 aa5.63□□□□□ -1.51
VPS13B-207ENST00000518569 LTKP29376 864 aa5.63□□□□□ -1.51
VPS13B-207ENST00000518569 CTSKP43235 329 aa5.63□□□□□ -1.51
VPS13B-207ENST00000518569 POU4F1Q01851 419 aa5.63□□□□□ -1.51
VPS13B-207ENST00000518569 EGR3Q06889 387 aa5.63□□□□□ -1.51
VPS13B-207ENST00000518569 SLC10A6Q3KNW5 377 aa5.63□□□□□ -1.51
VPS13B-207ENST00000518569 SLC23A3Q6PIS1 610 aa5.63□□□□□ -1.51
VPS13B-207ENST00000518569 ZNF574Q6ZN55 896 aaPredicted RBP5.63□□□□□ -1.51
VPS13B-207ENST00000518569 MRGPRX3Q96LB0 322 aa5.63□□□□□ -1.51
VPS13B-207ENST00000518569 CDK11AQ9UQ88 783 aaPredicted RBP5.63□□□□□ -1.51
VPS13B-207ENST00000518569 ZNF281Q9Y2X9 895 aa5.63□□□□□ -1.51
VPS13B-207ENST00000518569 PCDHA11Q9Y5I1 949 aa5.63□□□□□ -1.51
VPS13B-207ENST00000518569 SSU72P8A0A1W2PR75 194 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 H0Y8X5 98 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 IGSF3O75054 1194 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 ZNF205O95201 554 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 VAV1P15498 845 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 CD96P40200 585 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 TEKQ02763 1124 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 ZP2Q05996 745 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 IFRD2Q12894 506 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-207ENST00000518569 MTERF2Q49AM1 385 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 TRIM59Q8IWR1 403 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 LRRC47Q8N1G4 583 aaKnown RBP5.62□□□□□ -1.51
VPS13B-207ENST00000518569 LRRN4CLQ8ND94 238 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 ADCY4Q8NFM4 1077 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 CCDC120Q96HB5 630 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 MRFAP1L1Q96HT8 127 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 FMNL2Q96PY5 1086 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 ZSWIM4Q9H7M6 989 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 CARS2Q9HA77 564 aaKnown RBP5.62□□□□□ -1.51
VPS13B-207ENST00000518569 TCFL5Q9UL49 500 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 MINPP1Q9UNW1 487 aa5.62□□□□□ -1.51
VPS13B-207ENST00000518569 FAM221BA6H8Z2 402 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 MEIS1O00470 390 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 CAPNS1P04632 268 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 ITGAVP06756 1048 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 SYPP08247 313 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 AMPD2Q01433 879 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 CRTC3Q6UUV7 619 aa5.61□□□□□ -1.51
VPS13B-207ENST00000518569 ZNF227Q86WZ6 799 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms