RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 HERVK_113P62684 666 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 CCT2P78371 535 aaKnown RBP11.53□□□□□ -0.56
CLN8-202ENST00000517514 FGD1P98174 961 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 SREBF2Q12772 1141 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 STK3Q13188 491 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 RTN1Q16799 776 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 CCDC96Q2M329 555 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 GPATCH4Q5T3I0 446 aaKnown RBP11.53□□□□□ -0.56
CLN8-202ENST00000517514 LBX2Q6XYB7 198 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 TMTC3Q6ZXV5 915 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 ATG4CQ96DT6 458 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 MTMR8Q96EF0 704 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 TANGO6Q9C0B7 1094 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 RIOX1Q9H6W3 641 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 JMJD4Q9H9V9 463 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 TXNRD2Q9NNW7 524 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 ZCCHC17Q9NP64 241 aaKnown RBP11.53□□□□□ -0.56
CLN8-202ENST00000517514 PRR12Q9ULL5 1215 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 LIMCH1Q9UPQ0 1083 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 MGAMO43451 1857 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 PPP1R11O60927 126 aaPredicted RBP11.52□□□□□ -0.57
CLN8-202ENST00000517514 FLOT1O75955 427 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 CALM1P0DP23 149 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 CALM2P0DP24 149 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 CALM3P0DP25 149 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 TAL1P17542 331 aaPredicted RBP11.52□□□□□ -0.57
CLN8-202ENST00000517514 METAP2P50579 478 aaKnown RBP eCLIP11.52□□□□□ -0.57
CLN8-202ENST00000517514 COG2Q14746 738 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 ANKRD1Q15327 319 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 SYDE2Q5VT97 1194 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 ADGRF4Q8IZF3 695 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 GTF3C6Q969F1 213 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 SNX21Q969T3 373 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 SLF1Q9BQI6 1058 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 RNF186Q9NXI6 227 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 BTBD7Q9P203 1132 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 RBPJLQ9UBG7 517 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 FEM1BQ9UK73 627 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 ZNF536O15090 1300 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 MYPNQ86TC9 1320 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 CNTNAP5Q8WYK1 1306 aa11.52□□□□□ -0.57
CLN8-202ENST00000517514 PLXNB2O15031 1838 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 LCTP09848 1927 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 VWA5AO00534 786 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 ST18O60284 1047 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 BCRP11274 1271 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 STAT2P52630 851 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 CAP1Q01518 475 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 CRHR2Q13324 411 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 TMEM132BQ14DG7 1078 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 Q3C1V9 767 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 SYNE3Q6ZMZ3 975 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 FAM160B2Q86V87 743 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 REM2Q8IYK8 340 aaPredicted RBP11.51□□□□□ -0.57
CLN8-202ENST00000517514 PRPF38AQ8NAV1 312 aaKnown RBP11.51□□□□□ -0.57
CLN8-202ENST00000517514 IL27Q8NEV9 243 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 CTCFLQ8NI51 663 aaPredicted RBP11.51□□□□□ -0.57
CLN8-202ENST00000517514 KIFC2Q96AC6 838 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 SHISA4Q96DD7 197 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 TMX3Q96JJ7 454 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 SPZ1Q9BXG8 430 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 CFHR5Q9BXR6 569 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 RANBP17Q9H2T7 1088 aaKnown RBP11.51□□□□□ -0.57
CLN8-202ENST00000517514 SLC38A10Q9HBR0 1119 aa11.51□□□□□ -0.57
CLN8-202ENST00000517514 NAP1L2Q9ULW6 460 aaPredicted RBP11.51□□□□□ -0.57
CLN8-202ENST00000517514 ZNFX1Q9P2E3 1918 aaKnown RBP11.5□□□□□ -0.57
CLN8-202ENST00000517514 DOCK3Q8IZD9 2030 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 hCG_1642624A0A1W2PR95 340 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 CA12O43570 354 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 PPFIA3O75145 1194 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 IFNAR1P17181 557 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 OSBPP22059 807 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 SMARCA1P28370 1054 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 IRX3P78415 501 aaPredicted RBP11.5□□□□□ -0.57
CLN8-202ENST00000517514 PABPC4Q13310 644 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLN8-202ENST00000517514 TAF1CQ15572 869 aaPredicted RBP11.5□□□□□ -0.57
CLN8-202ENST00000517514 SAMD1Q6SPF0 538 aaPredicted RBP11.5□□□□□ -0.57
CLN8-202ENST00000517514 C17orf99Q6UX52 265 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 CCDC82Q8N4S0 544 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 JMYQ8N9B5 988 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 CHURC1Q8WUH1 139 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 PIGSQ96S52 555 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 SLKQ9H2G2 1235 aaPredicted RBP11.5□□□□□ -0.57
CLN8-202ENST00000517514 RBM28Q9NW13 759 aaKnown RBP11.5□□□□□ -0.57
CLN8-202ENST00000517514 HOXC10Q9NYD6 342 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 MORF4L1Q9UBU8 362 aa11.5□□□□□ -0.57
CLN8-202ENST00000517514 ZNF214Q9UL59 606 aaPredicted RBP11.5□□□□□ -0.57
CLN8-202ENST00000517514 RBBP6Q7Z6E9 1792 aaKnown RBP11.49□□□□□ -0.57
CLN8-202ENST00000517514 TLR2O60603 784 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 JAK2O60674 1132 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 TRPA1O75762 1119 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 FDPSP14324 419 aaKnown RBP11.49□□□□□ -0.57
CLN8-202ENST00000517514 KIF5BP33176 963 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 GNAQP50148 359 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 CUL4AQ13619 759 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 PPP2R5BQ15173 497 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 PKN1Q16512 942 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 CCDC83Q8IWF9 413 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 NSUN7Q8NE18 718 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms