RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 SLC4A4Q9Y6R1 1079 aa9.45□□□□□ -0.9
HMBOX1-204ENST00000517386 TTC28Q96AY4 2481 aa9.45□□□□□ -0.9
HMBOX1-204ENST00000517386 BAZ2AQ9UIF9 1905 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 SPTBN5Q9NRC6 3674 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 SEPT4O43236 478 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 STRNO43815 780 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 MSCO60682 206 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 IGSF3O75054 1194 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 IGHA2P01877 340 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 FCER1AP12319 257 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 TLE2Q04725 743 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 TSHZ3Q63HK5 1081 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 OLFML2BQ68BL8 750 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 MMP19Q99542 508 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 PUS7LQ9H0K6 701 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 PDLIM7Q9NR12 457 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 TMX2Q9Y320 296 aa9.44□□□□□ -0.9
HMBOX1-204ENST00000517386 RLFQ13129 1914 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 PQBP1O60828 265 aaKnown RBP9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 ITGB8P26012 769 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 EPHB4P54760 987 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 C20orf194Q5TEA3 1177 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 C12orf60Q5U649 245 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 CTR9Q6PD62 1173 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 SHCBP1Q8NEM2 672 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 COL25A1Q9BXS0 654 aaPredicted RBP9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 MROH8Q9H579 483 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 XPNPEP3Q9NQH7 507 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 ZBTB40Q9NUA8 1239 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 SLC5A4Q9NY91 659 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 SWAP70Q9UH65 585 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 SMCHD1A6NHR9 2005 aa9.43□□□□□ -0.9
HMBOX1-204ENST00000517386 MINDY4BA8MYZ0 360 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 VWA5AO00534 786 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 WDR46O15213 610 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 HMMRO75330 724 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 PRDM1O75626 825 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 RARBP10826 455 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 ATP5JP18859 108 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 STAT3P40763 770 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 KCTD2Q14681 263 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 ZNF697Q5TEC3 545 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 C16orf86Q6ZW13 317 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 RPAP2Q8IXW5 612 aaPredicted RBP9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 AMOTL1Q8IY63 956 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 CPXCR1Q8N123 301 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 MB21D1Q8N884 522 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 MYLIPQ8WY64 445 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 CDX2Q99626 313 aaPredicted RBP9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 HAUS7Q99871 368 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 TINF2Q9BSI4 451 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.42□□□□□ -0.97e-10■■■□□ 15.5
HMBOX1-204ENST00000517386 SH2D4AQ9H788 454 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 ATP8A2Q9NTI2 1148 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 ISY1Q9ULR0 285 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 CHD9Q3L8U1 2897 aa9.42□□□□□ -0.9
HMBOX1-204ENST00000517386 RAB11FIP3O75154 756 aa9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 RGS20O76081 388 aa9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 DIEXFQ68CQ4 756 aaKnown RBP9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 SNRNP48Q6IEG0 339 aaKnown RBP9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 TMED8Q6PL24 325 aaPredicted RBP9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 DDRGK1Q96HY6 314 aa9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 CCDC17Q96LX7 622 aa9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 TTYH1Q9H313 450 aaPredicted RBP9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 SEMA6BQ9H3T3 888 aa9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 KANSL2Q9H9L4 492 aa9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 GOPCQ9HD26 462 aa9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 ZHX1Q9UKY1 873 aaPredicted RBP9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 PPP1R9AQ9ULJ8 1098 aa9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 DDX19BQ9UMR2 479 aa9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 RIPK3Q9Y572 518 aa9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 DDX49Q9Y6V7 483 aaKnown RBP9.41□□□□□ -0.9
HMBOX1-204ENST00000517386 A0A0G2JMZ2 1700 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 A0A1W2PQ45 241 aaPredicted RBP9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 A0A1W2PQY0 241 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 MYADML2A6NDP7 307 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 SLC25A27O95847 323 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 NDUFB10O96000 172 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 ZNF865P0CJ78 1059 aaPredicted RBP9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 ZNF792Q3KQV3 632 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 RIOX2Q8IUF8 465 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 ABRAQ8N0Z2 381 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 REPS2Q8NFH8 660 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 KIFC2Q96AC6 838 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 DDX11Q96FC9 970 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 RNPC3Q96LT9 517 aaKnown RBP9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 RAVER2Q9HCJ3 691 aaKnown RBP9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 HOMER2Q9NSB8 354 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 CLIP2Q9UDT6 1046 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 ZNF214Q9UL59 606 aaPredicted RBP9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 PHF24Q9UPV7 400 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 MYH8P13535 1937 aa9.4□□□□□ -0.9
HMBOX1-204ENST00000517386 COL11A1P12107 1806 aaPredicted RBP9.4□□□□□ -0.91
HMBOX1-204ENST00000517386 LTBP2Q14767 1821 aa9.4□□□□□ -0.91
HMBOX1-204ENST00000517386 ZNFX1Q9P2E3 1918 aaKnown RBP9.39□□□□□ -0.91
HMBOX1-204ENST00000517386 ZBED9Q6R2W3 1325 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms