RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 TCRBV5S4A2TA0A5A2 114 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 F5H6K3 240 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 TLR3O15455 904 aaKnown RBP8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 ZFYP08048 801 aaPredicted RBP8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 C6orf222P0C671 652 aaPredicted RBP8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 FOSL2P15408 326 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 PDE4BQ07343 736 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 KLRC3Q07444 240 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 FAM109BQ6ICB4 259 aaPredicted RBP8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 CTR9Q6PD62 1173 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 POTEEQ6S8J3 1075 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 PCSK9Q8NBP7 692 aaKnown RBP8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 IL27Q8NEV9 243 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 HOMER2Q9NSB8 354 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 FBXO28Q9NVF7 368 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 FBXO40Q9UH90 709 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 RCAN3Q9UKA8 241 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 DIS3Q9Y2L1 958 aaKnown RBP8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 LAMA3Q16787 3333 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 MROH7Q68CQ1 1323 aa8.78□□□□□ -1
TNFRSF11B-202ENST00000517352 ERC2O15083 957 aa8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SMARCA5O60264 1052 aaPredicted RBP8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ACLYP53396 1101 aa8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SLFNL1Q499Z3 407 aa8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 GNASQ5JWF2 1037 aa8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PPP4R3BQ5MIZ7 849 aa8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MSL3Q8N5Y2 521 aaKnown RBP8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MAFAQ8NHW3 353 aaPredicted RBP8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SYMPKQ92797 1274 aaKnown RBP8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CHMP4CQ96CF2 233 aa8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 NUP88Q99567 741 aaPredicted RBP8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CDX2Q99626 313 aaPredicted RBP8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PUS7LQ9H0K6 701 aaKnown RBP8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 AP5M1Q9H0R1 490 aa8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 NAPBQ9H115 298 aa8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MTIF3Q9H2K0 278 aaKnown RBP8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TOMM22Q9NS69 142 aa8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ZBTB40Q9NUA8 1239 aa8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 FEM1BQ9UK73 627 aa8.77□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MAST2Q6P0Q8 1798 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PHIPQ8WWQ0 1821 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 A0A1W2PQ45 241 aaPredicted RBP8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 A0A1W2PQY0 241 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MOXD2PA6NHM9 499 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 POTEB2H3BUK9 544 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 RNF113AO15541 343 aaKnown RBP8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ZEB2O60315 1214 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PRDM1O75626 825 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TTLL1O95922 423 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SMAD3P84022 425 aaKnown RBP8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 KIAA1755Q5JYT7 1200 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 C9orf50Q5SZB4 431 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 GIMAP6Q6P9H5 292 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TMEM199Q8N511 208 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CHURC1Q8WUH1 139 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PPM1EQ8WY54 764 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 APPBP2Q92624 585 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 GAS2L1Q99501 681 aaPredicted RBP8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TSEN34Q9BSV6 310 aaKnown RBP8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 FSD1Q9BTV5 496 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SEMA6BQ9H3T3 888 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 RAVER2Q9HCJ3 691 aaKnown RBP8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PDLIM7Q9NR12 457 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 STX8Q9UNK0 236 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PHF24Q9UPV7 400 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MTMR7Q9Y216 660 aa8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 DDX60LQ5H9U9 1706 aaKnown RBP8.76□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ATAD5Q96QE3 1844 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TRIM43BA6NCK2 446 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 GPAA1O43292 621 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 DUSP11O75319 330 aaKnown RBP8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 NDUFB10O96000 172 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 HMGB1P09429 215 aaKnown RBP8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 FDX1P10109 184 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 BMP3P12645 472 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TAL1P17542 331 aaPredicted RBP8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SLC1A4P43007 532 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 STAT2P52630 851 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ACVR2BQ13705 512 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 KCNA10Q16322 511 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ZNF792Q3KQV3 632 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 C1orf53Q5VUE5 145 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SLFN13Q68D06 897 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SH3RF1Q7Z6J0 888 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SIAH1Q8IUQ4 282 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 LRRC47Q8N1G4 583 aaKnown RBP8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 KBTBD3Q8NAB2 608 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ZNF579Q8NAF0 562 aaKnown RBP8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CHST13Q8NET6 341 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MYLIPQ8WY64 445 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TRIM43Q96BQ3 446 aaPredicted RBP8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 GUCD1Q96NT3 240 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 STRBPQ96SI9 672 aaKnown RBP8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MPHOSPH6Q99547 160 aaKnown RBP8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ABHD16BQ9H3Z7 469 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 NYAP2Q9P242 653 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MSRAQ9UJ68 235 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PTPRFP10586 1907 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms