RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 VPS33BQ9H267 617 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 BICC1Q9H694 974 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 NPHS2Q9NP85 383 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 NDFIP2Q9NV92 336 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 BSDC1Q9NW68 430 aaPredicted RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 DNAJB12Q9NXW2 375 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 AKAP2Q9Y2D5 859 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 NOP58Q9Y2X3 529 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 LRRFIP2Q9Y608 721 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 MYH3P11055 1940 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 LTBP1Q14766 1721 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 MROH5Q6ZUA9 1318 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 DUOX1Q9NRD9 1551 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 UTRNP46939 3433 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ZNF609O15014 1411 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 PNMA6EA0A0J9YXQ4 647 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 EYA2O00167 538 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 SRGAP3O43295 1099 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 RAB11FIP3O75154 756 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 TRPA1O75762 1119 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 SMNDC1O75940 238 aaKnown RBP eCLIP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 MAP3K6O95382 1288 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 HCLS1P14317 486 aaPredicted RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 DPEP1P16444 411 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 EIF4BP23588 611 aaKnown RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ADH6P28332 368 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 CDC25BP30305 580 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 IRS1P35568 1242 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 IL15P40933 162 aaPredicted RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 RPS8P62241 208 aaKnown RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ATP8B2P98198 1209 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 FMR1Q06787 632 aaKnown RBP eCLIP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 UBE4AQ14139 1066 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 TSNAXIP1Q2TAA8 658 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 CCDC93Q567U6 631 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 DALRD3Q5D0E6 543 aaKnown RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 CEP135Q66GS9 1140 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GDF6Q6KF10 455 aaPredicted RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 PRPF40BQ6NWY9 871 aaKnown RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 NXPE4Q6UWF7 544 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 PI16Q6UXB8 463 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 LDHAL6AQ6ZMR3 332 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 DTHD1Q6ZMT9 781 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 C15orf52Q6ZUT6 534 aaKnown RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 FBXO33Q7Z6M2 555 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 C2CD5Q86YS7 1000 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ERC1Q8IUD2 1116 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ANKRD18AQ8IVF6 992 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 SIRT2Q8IXJ6 389 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GALNT12Q8IXK2 581 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 SP8Q8IXZ3 490 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 SYNE4Q8N205 404 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 TTLL6Q8N841 843 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 VGLL2Q8N8G2 317 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 TMEM87AQ8NBN3 555 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GALNT6Q8NCL4 622 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 NUDT8Q8WV74 236 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 CELF1Q92879 486 aaKnown RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GCC1Q96CN9 775 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 RBM17Q96I25 401 aaKnown RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 FRMD6Q96NE9 622 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 MPHOSPH8Q99549 860 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 RTFDC1Q9BY42 306 aaPredicted RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 OXCT2Q9BYC2 517 aaPredicted RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ANKRD2Q9GZV1 360 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 CHRDQ9H2X0 955 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GREM2Q9H772 168 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 DCTPP1Q9H773 170 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 RRAGCQ9HB90 399 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GPR108Q9NPR9 543 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 PIM2Q9P1W9 311 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 PPP1R1BQ9UD71 204 aaPredicted RBP2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GGA1Q9UJY5 639 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ATP6V0A2Q9Y487 856 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 RIPOR2Q9Y4F9 1068 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 MED23Q9ULK4 1368 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ARFGEF1Q9Y6D6 1849 aa2.7□□□□□ -1.98
SCARNA16.3-201ENST00000516595 COL4A1P02462 1669 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ZNF804BA4D1E1 1349 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 XDHP47989 1333 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 PDS5AQ29RF7 1337 aaKnown RBP2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 KDM2BQ8NHM5 1336 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 IRS2Q9Y4H2 1338 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ARAP2Q8WZ64 1704 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 A0A1W2PP55 124 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 UNCXA6NJT0 531 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ZBTB42B2RXF5 422 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GIPC1O14908 333 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GRIN3BO60391 1043 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 SIN3BO75182 1162 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 RGS9O75916 674 aaPredicted RBP2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 WFS1O76024 890 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 PDE8BO95263 885 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ARAFP10398 606 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 FGFR2P21802 821 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 CHRNA5P30532 468 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GNA15P30679 374 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ADH7P40394 386 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 NRLP54845 237 aa2.69□□□□□ -1.98
SCARNA16.3-201ENST00000516595 FCGRTP55899 365 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms