RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 NELFCDQ8IXH7 590 aa11.4□□□□□ -0.58
SMG7-215ENST00000515829 KLHL7Q8IXQ5 586 aa11.4□□□□□ -0.58
SMG7-215ENST00000515829 DYDC1Q8WWB3 177 aa11.4□□□□□ -0.58
SMG7-215ENST00000515829 RRP15Q9Y3B9 282 aaKnown RBP11.4□□□□□ -0.58
SMG7-215ENST00000515829 KNDC1Q76NI1 1749 aa11.4□□□□□ -0.58
SMG7-215ENST00000515829 CXCR5P32302 372 aa11.4□□□□□ -0.58
SMG7-215ENST00000515829 TRAF1Q13077 416 aa11.4□□□□□ -0.58
SMG7-215ENST00000515829 TC2NQ8N9U0 490 aa11.4□□□□□ -0.58
SMG7-215ENST00000515829 PNMA1Q8ND90 353 aa11.4□□□□□ -0.58
SMG7-215ENST00000515829 TMEM94Q12767 1356 aa11.4□□□□□ -0.58
SMG7-215ENST00000515829 RNF40O75150 1001 aa11.4□□□□□ -0.59
SMG7-215ENST00000515829 NDUFA10O95299 355 aa11.4□□□□□ -0.59
SMG7-215ENST00000515829 NONOQ15233 471 aaKnown RBP eCLIP11.4□□□□□ -0.59
SMG7-215ENST00000515829 TGFBRAP1Q8WUH2 860 aa11.4□□□□□ -0.59
SMG7-215ENST00000515829 DIP2AQ14689 1571 aa11.4□□□□□ -0.59
SMG7-215ENST00000515829 NEFHP12036 1026 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 ATP1A2P50993 1020 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 SF3A3Q12874 501 aaKnown RBP eCLIP11.39□□□□□ -0.592e-7■■■■■ 49.4
SMG7-215ENST00000515829 FAM71BQ8TC56 605 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 IGDCC4Q8TDY8 1250 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 FBXO2Q9UK22 296 aaPredicted RBP11.39□□□□□ -0.59
SMG7-215ENST00000515829 GUCY2FP51841 1108 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 ISCA1Q9BUE6 129 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 HDAC6Q9UBN7 1215 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 SMIM23A6NLE4 172 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 GSG1L2A8MUP6 293 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 NMT2O60551 498 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 NCAPHQ15003 741 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 REXO1L1PQ8IX06 675 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 EXOC4Q96A65 974 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 L2HGDHQ9H9P8 463 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 PPP1R1BQ9UD71 204 aaPredicted RBP11.39□□□□□ -0.59
SMG7-215ENST00000515829 WDR17Q8IZU2 1322 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 C2orf54Q08AI8 447 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 PPP4R3AQ6IN85 833 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 PXDNQ92626 1479 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 SMCO2A6NFE2 343 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 TCP11X2Q5H9J9 407 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 DCAF17Q5H9S7 520 aaPredicted RBP11.39□□□□□ -0.59
SMG7-215ENST00000515829 GIMAP7Q8NHV1 300 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 SNX29Q8TEQ0 813 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 NOX5Q96PH1 765 aa11.39□□□□□ -0.59
SMG7-215ENST00000515829 ZNF658Q5TYW1 1059 aaPredicted RBP11.38□□□□□ -0.59
SMG7-215ENST00000515829 KCTD16Q68DU8 428 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 CNOT6LQ96LI5 555 aaKnown RBP11.38□□□□□ -0.59
SMG7-215ENST00000515829 RIPOR2Q9Y4F9 1068 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 RIMS1Q86UR5 1692 aaKnown RBP11.38□□□□□ -0.59
SMG7-215ENST00000515829 COL15A1P39059 1388 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 STXBP4Q6ZWJ1 553 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 GSPT2Q8IYD1 628 aaKnown RBP11.38□□□□□ -0.59
SMG7-215ENST00000515829 ABHD10Q9NUJ1 306 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 MKRN1Q9UHC7 482 aaKnown RBP11.38□□□□□ -0.59
SMG7-215ENST00000515829 TLDC2A0PJX2 215 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 PLA2G4AP47712 749 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 GNGT1P63211 74 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 MAP3K9P80192 1104 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 RAD9BQ6WBX8 426 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 SGMS1Q86VZ5 419 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 NGLY1Q96IV0 654 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.38□□□□□ -0.59
SMG7-215ENST00000515829 RWDD2AQ9UIY3 292 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 DIP2BQ9P265 1576 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 HLA-DOAP06340 250 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 SUSD4Q5VX71 490 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 FHOD1Q9Y613 1164 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 CPDO75976 1380 aa11.38□□□□□ -0.59
SMG7-215ENST00000515829 PRPF3O43395 683 aaKnown RBP11.37□□□□□ -0.59
SMG7-215ENST00000515829 CYP2C19P33261 490 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 SSR1P43307 286 aaKnown RBP11.37□□□□□ -0.59
SMG7-215ENST00000515829 TEX11Q8IYF3 940 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 BCAS4Q8TDM0 211 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 UBLCP1Q8WVY7 318 aaPredicted RBP11.37□□□□□ -0.59
SMG7-215ENST00000515829 TRIM31Q9BZY9 425 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 SUGCTQ9HAC7 445 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 MED4Q9NPJ6 270 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 ANKRD26Q9UPS8 1709 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 TCHHQ07283 1943 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 WDR19Q8NEZ3 1342 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 LONP1P36776 959 aaKnown RBP11.37□□□□□ -0.59
SMG7-215ENST00000515829 LIG3P49916 1009 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 CETN1Q12798 172 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 TPTE2Q6XPS3 522 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 SELENOOQ9BVL4 669 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 KCNJ6P48051 423 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 CCT5P48643 541 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 ENAHQ8N8S7 591 aaPredicted RBP11.37□□□□□ -0.59
SMG7-215ENST00000515829 STAG1Q8WVM7 1258 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 FXR1P51114 621 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMG7-215ENST00000515829 PTPAQ15257 358 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 SLC9C1Q4G0N8 1177 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 ZNF579Q8NAF0 562 aaKnown RBP11.37□□□□□ -0.59
SMG7-215ENST00000515829 TRIM58Q8NG06 486 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 TBCAO75347 108 aaKnown RBP11.37□□□□□ -0.59
SMG7-215ENST00000515829 DDAH1O94760 285 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 H2AFXP16104 143 aaPredicted RBP11.37□□□□□ -0.59
SMG7-215ENST00000515829 INPP5BP32019 993 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 RFC4P35249 363 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 KCNQ4P56696 695 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 VSNL1P62760 191 aa11.37□□□□□ -0.59
SMG7-215ENST00000515829 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 237.8 ms