RNA–Protein interactions for RNA: ENST00000515809.1

RBM47-215, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 229 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-215ENST00000515809 RTN1Q16799 776 aa16.52■□□□□ 0.24
RBM47-215ENST00000515809 LBX2Q6XYB7 198 aa16.52■□□□□ 0.24
RBM47-215ENST00000515809 MB21D1Q8N884 522 aa16.52■□□□□ 0.24
RBM47-215ENST00000515809 KIFC2Q96AC6 838 aa16.52■□□□□ 0.24
RBM47-215ENST00000515809 ZNF274Q96GC6 653 aaPredicted RBP16.52■□□□□ 0.24
RBM47-215ENST00000515809 LZTS2Q9BRK4 669 aa16.52■□□□□ 0.24
RBM47-215ENST00000515809 CFHR5Q9BXR6 569 aa16.52■□□□□ 0.24
RBM47-215ENST00000515809 KLRF2D3W0D1 207 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 RXRAP19793 462 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 DSG3P32926 999 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 MCM2P49736 904 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 CRHR2Q13324 411 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 SYDE2Q5VT97 1194 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 BTNL9Q6UXG8 535 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 NOL8Q76FK4 1167 aaKnown RBP16.51■□□□□ 0.23
RBM47-215ENST00000515809 RAB11FIP4Q86YS3 637 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 CCDC144CPQ8IYA2 1237 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 FANCBQ8NB91 859 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 FBXO28Q9NVF7 368 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 RNF186Q9NXI6 227 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 MAD2L2Q9UI95 211 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 PLXNB2O15031 1838 aa16.51■□□□□ 0.23
RBM47-215ENST00000515809 PALM3A6NDB9 673 aaPredicted RBP16.5■□□□□ 0.23
RBM47-215ENST00000515809 TLR2O60603 784 aa16.5■□□□□ 0.23
RBM47-215ENST00000515809 TRPA1O75762 1119 aa16.5■□□□□ 0.23
RBM47-215ENST00000515809 JMYQ8N9B5 988 aa16.5■□□□□ 0.23
RBM47-215ENST00000515809 ATG4CQ96DT6 458 aa16.5■□□□□ 0.23
RBM47-215ENST00000515809 P2RX7Q99572 595 aaKnown RBP16.5■□□□□ 0.23
RBM47-215ENST00000515809 SLKQ9H2G2 1235 aaPredicted RBP16.5■□□□□ 0.23
RBM47-215ENST00000515809 LIMCH1Q9UPQ0 1083 aa16.5■□□□□ 0.23
RBM47-215ENST00000515809 ADGRA2Q96PE1 1338 aa16.49■□□□□ 0.23
RBM47-215ENST00000515809 ZBED4O75132 1171 aa16.49■□□□□ 0.23
RBM47-215ENST00000515809 PDIA3P30101 505 aaKnown RBP16.49■□□□□ 0.23
RBM47-215ENST00000515809 SLC16A2P36021 539 aa16.49■□□□□ 0.23
RBM47-215ENST00000515809 FAM110CQ1W6H9 321 aa16.49■□□□□ 0.23
RBM47-215ENST00000515809 TTBK2Q6IQ55 1244 aa16.49■□□□□ 0.23
RBM47-215ENST00000515809 CPLX2Q6PUV4 134 aaKnown RBP16.49■□□□□ 0.23
RBM47-215ENST00000515809 STAG2Q8N3U4 1231 aa16.49■□□□□ 0.23
RBM47-215ENST00000515809 PAGR1Q9BTK6 254 aa16.49■□□□□ 0.23
RBM47-215ENST00000515809 SPZ1Q9BXG8 430 aa16.49■□□□□ 0.23
RBM47-215ENST00000515809 PNMA2Q9UL42 364 aa16.49■□□□□ 0.23
RBM47-215ENST00000515809 PRR12Q9ULL5 1215 aa16.49■□□□□ 0.23
RBM47-215ENST00000515809 RABGAP1Q9Y3P9 1069 aa16.49■□□□□ 0.23
RBM47-215ENST00000515809 BAZ2BQ9UIF8 2168 aaKnown RBP16.48■□□□□ 0.23
RBM47-215ENST00000515809 VWA5AO00534 786 aa16.48■□□□□ 0.23
RBM47-215ENST00000515809 CPLX1O14810 134 aa16.48■□□□□ 0.23
RBM47-215ENST00000515809 SMARCA1P28370 1054 aa16.48■□□□□ 0.23
RBM47-215ENST00000515809 OAZ1P54368 228 aa16.48■□□□□ 0.23
RBM47-215ENST00000515809 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
RBM47-215ENST00000515809 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
RBM47-215ENST00000515809 SH2B1Q9NRF2 756 aaPredicted RBP16.48■□□□□ 0.23
RBM47-215ENST00000515809 WBP1LQ9NX94 342 aa16.48■□□□□ 0.23
RBM47-215ENST00000515809 SEC63Q9UGP8 760 aaKnown RBP16.48■□□□□ 0.23
RBM47-215ENST00000515809 TPCN1Q9ULQ1 816 aa16.48■□□□□ 0.23
RBM47-215ENST00000515809 CEP350Q5VT06 3117 aa16.48■□□□□ 0.23
RBM47-215ENST00000515809 CDKL5O76039 1030 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 COPB2P35606 906 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 CCNA1P78396 465 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 STK3Q13188 491 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 ADGRF4Q8IZF3 695 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 ANKRD13CQ8N6S4 541 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 LARP6Q9BRS8 491 aaKnown RBP16.47■□□□□ 0.23
RBM47-215ENST00000515809 UBA5Q9GZZ9 404 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 RANBP17Q9H2T7 1088 aaKnown RBP16.47■□□□□ 0.23
RBM47-215ENST00000515809 SLC38A10Q9HBR0 1119 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 MORF4L1Q9UBU8 362 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 CPA4Q9UI42 421 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 ADAMTS5Q9UNA0 930 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 HPS5Q9UPZ3 1129 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 ZNF236Q9UL36 1845 aa16.47■□□□□ 0.23
RBM47-215ENST00000515809 PFKFB2O60825 505 aa16.46■□□□□ 0.23
RBM47-215ENST00000515809 PLEKHA8P1O95397 391 aa16.46■□□□□ 0.23
RBM47-215ENST00000515809 TBC1D8O95759 1140 aa16.46■□□□□ 0.23
RBM47-215ENST00000515809 ERVK-9P63128 1117 aa16.46■□□□□ 0.23
RBM47-215ENST00000515809 ERVK-24P63145 666 aa16.46■□□□□ 0.23
RBM47-215ENST00000515809 CCT2P78371 535 aaKnown RBP16.46■□□□□ 0.23
RBM47-215ENST00000515809 TRAF1Q13077 416 aa16.46■□□□□ 0.23
RBM47-215ENST00000515809 PLS1Q14651 629 aa16.46■□□□□ 0.23
RBM47-215ENST00000515809 CDC37Q16543 378 aaPredicted RBP16.46■□□□□ 0.23
RBM47-215ENST00000515809 GPRC5AQ8NFJ5 357 aa16.46■□□□□ 0.23
RBM47-215ENST00000515809 GTF3C6Q969F1 213 aa16.46■□□□□ 0.23
RBM47-215ENST00000515809 RRP36Q96EU6 259 aaKnown RBP16.46■□□□□ 0.23
RBM47-215ENST00000515809 TEX13BQ9BXU2 312 aa16.46■□□□□ 0.23
RBM47-215ENST00000515809 RBM27Q9P2N5 1060 aaKnown RBP16.46■□□□□ 0.23
RBM47-215ENST00000515809 CNTNAP5Q8WYK1 1306 aa16.45■□□□□ 0.22
RBM47-215ENST00000515809 BCRP11274 1271 aa16.45■□□□□ 0.22
RBM47-215ENST00000515809 CDC27P30260 824 aa16.45■□□□□ 0.22
RBM47-215ENST00000515809 AKAP17AQ02040 695 aaKnown RBP16.45■□□□□ 0.22
RBM47-215ENST00000515809 ME3Q16798 604 aa16.45■□□□□ 0.22
RBM47-215ENST00000515809 NOM1Q5C9Z4 860 aaKnown RBP16.45■□□□□ 0.22
RBM47-215ENST00000515809 CCDC174Q6PII3 467 aa16.45■□□□□ 0.22
RBM47-215ENST00000515809 HOMER1Q86YM7 354 aa16.45■□□□□ 0.22
RBM47-215ENST00000515809 CCAR1Q8IX12 1150 aaKnown RBP16.45■□□□□ 0.22
RBM47-215ENST00000515809 TRIM22Q8IYM9 498 aa16.45■□□□□ 0.22
RBM47-215ENST00000515809 CPVLQ9H3G5 476 aa16.45■□□□□ 0.22
RBM47-215ENST00000515809 RIOX1Q9H6W3 641 aa16.45■□□□□ 0.22
RBM47-215ENST00000515809 CWC22Q9HCG8 908 aaKnown RBP16.45■□□□□ 0.22
RBM47-215ENST00000515809 ZSWIM8A7E2V4 1837 aa16.45■□□□□ 0.22
RBM47-215ENST00000515809 CASP8AP2Q9UKL3 1982 aa16.44■□□□□ 0.22
RBM47-215ENST00000515809 ATP2A1O14983 1001 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms