RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 XIRP2A4UGR9 3374 aa12.74□□□□□ -0.37
CLDND1-231ENST00000515620 WDR46O15213 610 aaKnown RBP12.74□□□□□ -0.37
CLDND1-231ENST00000515620 TLR3O15455 904 aaKnown RBP12.74□□□□□ -0.37
CLDND1-231ENST00000515620 CST5P28325 142 aaPredicted RBP12.74□□□□□ -0.37
CLDND1-231ENST00000515620 RABGGTBP53611 331 aa12.74□□□□□ -0.37
CLDND1-231ENST00000515620 OTOP2Q7RTS6 562 aa12.74□□□□□ -0.37
CLDND1-231ENST00000515620 FAM126BQ8IXS8 530 aa12.74□□□□□ -0.37
CLDND1-231ENST00000515620 PCSK9Q8NBP7 692 aaKnown RBP12.74□□□□□ -0.37
CLDND1-231ENST00000515620 RIOK1Q9BRS2 568 aaKnown RBP12.74□□□□□ -0.37
CLDND1-231ENST00000515620 SH2D4AQ9H788 454 aa12.74□□□□□ -0.37
CLDND1-231ENST00000515620 VCPKMTQ9H867 229 aa12.74□□□□□ -0.37
CLDND1-231ENST00000515620 FBXO28Q9NVF7 368 aa12.74□□□□□ -0.37
CLDND1-231ENST00000515620 MCM9Q9NXL9 1143 aa12.74□□□□□ -0.37
CLDND1-231ENST00000515620 TMX2Q9Y320 296 aa12.74□□□□□ -0.37
CLDND1-231ENST00000515620 PIEZO1Q92508 2521 aa12.73□□□□□ -0.37
CLDND1-231ENST00000515620 CHD7Q9P2D1 2997 aa12.73□□□□□ -0.37
CLDND1-231ENST00000515620 ZNFX1Q9P2E3 1918 aaKnown RBP12.73□□□□□ -0.37
CLDND1-231ENST00000515620 ARVCFO00192 962 aa12.73□□□□□ -0.37
CLDND1-231ENST00000515620 ERC2O15083 957 aa12.73□□□□□ -0.37
CLDND1-231ENST00000515620 DUSP11O75319 330 aaKnown RBP12.73□□□□□ -0.37
CLDND1-231ENST00000515620 FGBP02675 491 aa12.73□□□□□ -0.37
CLDND1-231ENST00000515620 CYP2D6P10635 497 aa12.73□□□□□ -0.37
CLDND1-231ENST00000515620 MYOGP15173 224 aa12.73□□□□□ -0.37
CLDND1-231ENST00000515620 STAT3P40763 770 aa12.73□□□□□ -0.37
CLDND1-231ENST00000515620 ANTXR1Q9H6X2 564 aa12.73□□□□□ -0.37
CLDND1-231ENST00000515620 UMODL1Q5DID0 1318 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 MAGEB6P1A0A0J9YX57 407 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 FAM86C2PA6NEL3 165 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 VWA5AO00534 786 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 ADCY6O43306 1168 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 RAD21O60216 631 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 SNAI1O95863 264 aaPredicted RBP12.72□□□□□ -0.37
CLDND1-231ENST00000515620 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
CLDND1-231ENST00000515620 AKR1B1P15121 316 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 COPB2P35606 906 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 SIAH1Q8IUQ4 282 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 MSL3Q8N5Y2 521 aaKnown RBP12.72□□□□□ -0.37
CLDND1-231ENST00000515620 DYNLL2Q96FJ2 89 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 CRNKL1Q9BZJ0 848 aaKnown RBP12.72□□□□□ -0.37
CLDND1-231ENST00000515620 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
CLDND1-231ENST00000515620 HIPK3Q9H422 1215 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 SPC25Q9HBM1 224 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 ZNF214Q9UL59 606 aaPredicted RBP12.72□□□□□ -0.37
CLDND1-231ENST00000515620 ADAMTS5Q9UNA0 930 aa12.72□□□□□ -0.37
CLDND1-231ENST00000515620 LRRC37A2A6NM11 1700 aa12.71□□□□□ -0.37
CLDND1-231ENST00000515620 GNASQ5JWF2 1037 aa12.71□□□□□ -0.37
CLDND1-231ENST00000515620 SDR42E1Q8WUS8 393 aa12.71□□□□□ -0.37
CLDND1-231ENST00000515620 UPF3AQ9H1J1 476 aaKnown RBP12.71□□□□□ -0.37
CLDND1-231ENST00000515620 PPP1R9AQ9ULJ8 1098 aa12.71□□□□□ -0.37
CLDND1-231ENST00000515620 SLC4A7Q9Y6M7 1214 aa12.71□□□□□ -0.37
CLDND1-231ENST00000515620 REV3LO60673 3130 aa12.71□□□□□ -0.38
CLDND1-231ENST00000515620 ZBBXA8MT70 800 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 RFXAPO00287 272 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 GTPBP6O43824 516 aaPredicted RBP12.7□□□□□ -0.38
CLDND1-231ENST00000515620 SURF6O75683 361 aaKnown RBP12.7□□□□□ -0.38
CLDND1-231ENST00000515620 CD4P01730 458 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 RARSP54136 660 aaKnown RBP12.7□□□□□ -0.38
CLDND1-231ENST00000515620 CCL23P55773 120 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 GJA9P57773 515 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 ACVR2BQ13705 512 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 POLA2Q14181 598 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 CCDC144BQ3MJ40 725 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 FAM83BQ5T0W9 1011 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 SNRNP48Q6IEG0 339 aaKnown RBP12.7□□□□□ -0.38
CLDND1-231ENST00000515620 MAMDC4Q6UXC1 1216 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 REPS2Q8NFH8 660 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 ARHGAP45Q92619 1136 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 KHSRPQ92945 711 aaKnown RBP eCLIP12.7□□□□□ -0.383e-6■■■□□ 14.8
CLDND1-231ENST00000515620 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 DCP1AQ9NPI6 582 aaPredicted RBP12.7□□□□□ -0.38
CLDND1-231ENST00000515620 C11orf16Q9NQ32 467 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.7□□□□□ -0.38
CLDND1-231ENST00000515620 SWAP70Q9UH65 585 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 TNNQ9UQP3 1299 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 PCDHA11Q9Y5I1 949 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 MTCH2Q9Y6C9 303 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 MUC6Q6W4X9 2439 aa12.7□□□□□ -0.38
CLDND1-231ENST00000515620 DNAJC25-GNG10A0A024R161 153 aa12.69□□□□□ -0.38
CLDND1-231ENST00000515620 ATP2A2P16615 1042 aaKnown RBP12.69□□□□□ -0.38
CLDND1-231ENST00000515620 SLC4A3P48751 1232 aa12.69□□□□□ -0.38
CLDND1-231ENST00000515620 BEX3Q00994 111 aa12.69□□□□□ -0.38
CLDND1-231ENST00000515620 KRT40Q6A162 431 aa12.69□□□□□ -0.38
CLDND1-231ENST00000515620 TMED8Q6PL24 325 aaPredicted RBP12.69□□□□□ -0.38
CLDND1-231ENST00000515620 ALYREFQ86V81 257 aaKnown RBP12.69□□□□□ -0.38
CLDND1-231ENST00000515620 EAF2Q96CJ1 260 aaPredicted RBP12.69□□□□□ -0.38
CLDND1-231ENST00000515620 TEX13BQ9BXU2 312 aa12.69□□□□□ -0.38
CLDND1-231ENST00000515620 CERS4Q9HA82 394 aa12.69□□□□□ -0.38
CLDND1-231ENST00000515620 MYH8P13535 1937 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 PRRC2BQ5JSZ5 2229 aaKnown RBP12.68□□□□□ -0.38
CLDND1-231ENST00000515620 CTAGE5O15320 804 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 TLL1O43897 1013 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 GPR37L1O60883 481 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 BCAR3O75815 825 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 CA3P07451 260 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 EEF2P13639 858 aaKnown RBP12.68□□□□□ -0.38
CLDND1-231ENST00000515620 TRIM27P14373 513 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 PDE6AP16499 860 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 CXCL17Q6UXB2 119 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 TRMT2AQ8IZ69 625 aaKnown RBP12.68□□□□□ -0.38
CLDND1-231ENST00000515620 LCORLQ8N3X6 602 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms