RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 LRCH2Q5VUJ6 765 aa15.96■□□□□ 0.14
TRIO-222ENST00000515144 GSDMBQ8TAX9 411 aa15.96■□□□□ 0.14
TRIO-222ENST00000515144 COA7Q96BR5 231 aa15.96■□□□□ 0.14
TRIO-222ENST00000515144 DISC1Q9NRI5 854 aa15.96■□□□□ 0.14
TRIO-222ENST00000515144 SYNMO15061 1565 aa15.96■□□□□ 0.14
TRIO-222ENST00000515144 OATP04181 439 aa15.96■□□□□ 0.14
TRIO-222ENST00000515144 SMC1BQ8NDV3 1235 aa15.96■□□□□ 0.14
TRIO-222ENST00000515144 TDRD3Q9H7E2 651 aaKnown RBP15.96■□□□□ 0.14
TRIO-222ENST00000515144 GOLGA6CA6NDK9 693 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 GOLGA6BA6NDN3 693 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 GOLGA6DP0CG33 693 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 PIK3CAP42336 1068 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 GOLGA6AQ9NYA3 693 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 TAB2Q9NYJ8 693 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 ZBTB16Q05516 673 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 TTC30BQ8N4P2 665 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 IGSF22Q8N9C0 903 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 MEIS1O00470 390 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 P4HA1P13674 534 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 ME3Q16798 604 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 CC2D2BQ6DHV5 1058 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 CCT6BQ92526 530 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 NLRC4Q9NPP4 1024 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 HEG1Q9ULI3 1381 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 RIMBP3CA6NJZ7 1639 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 RIMBP3BA6NNM3 1639 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 RIMBP3Q9UFD9 1639 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 AKR1B15C9JRZ8 316 aaPredicted RBP15.95■□□□□ 0.14
TRIO-222ENST00000515144 ECE2O60344 883 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 SRGAP2CP0DJJ0 459 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 SMC5Q8IY18 1101 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 ZNF710Q8N1W2 664 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 PFDN4Q9NQP4 134 aa15.95■□□□□ 0.14
TRIO-222ENST00000515144 NOX5Q96PH1 765 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 INO80B-WBP1J3KQ70 363 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 TICAM2Q86XR7 235 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 INO80BQ9C086 356 aaPredicted RBP15.94■□□□□ 0.14
TRIO-222ENST00000515144 MED23Q9ULK4 1368 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 ERBB3P21860 1342 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 DDX23Q9BUQ8 820 aaKnown RBP15.94■□□□□ 0.14
TRIO-222ENST00000515144 ANTXR1Q9H6X2 564 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 CERKQ8TCT0 537 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 WRNIP1Q96S55 665 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 CAMSAP1Q5T5Y3 1602 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 CCND2P30279 289 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 ATP8A2Q9NTI2 1148 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 ZEB2O60315 1214 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 FAM160B1Q5W0V3 765 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 ZBTB33Q86T24 672 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 TBC1D31Q96DN5 1066 aa15.94■□□□□ 0.14
TRIO-222ENST00000515144 FAM178BQ8IXR5 827 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 ARHGEF1Q92888 912 aaKnown RBP15.93■□□□□ 0.14
TRIO-222ENST00000515144 CTAGE15A4D2H0 777 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 CTAGE8P0CG41 777 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 BCRP11274 1271 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 CTAGE6Q86UF2 777 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 CTAGE4Q8IX94 777 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 DSCC1Q9BVC3 393 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 PRDM5Q9NQX1 630 aaPredicted RBP15.93■□□□□ 0.14
TRIO-222ENST00000515144 FAM207AQ9NSI2 230 aaPredicted RBP15.93■□□□□ 0.14
TRIO-222ENST00000515144 MAGED2Q9UNF1 606 aaPredicted RBP15.93■□□□□ 0.14
TRIO-222ENST00000515144 FER1L4A9Z1Z3 1794 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 POTEB2H3BUK9 544 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 ABCB4P21439 1286 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 TSGA10Q9BZW7 698 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 SF3A3Q12874 501 aaKnown RBP eCLIP15.93■□□□□ 0.141e-6■■■■□ 20.2
TRIO-222ENST00000515144 PI4K2BQ8TCG2 481 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 SH3RF3Q8TEJ3 882 aaPredicted RBP15.93■□□□□ 0.14
TRIO-222ENST00000515144 LLPHQ9BRT6 129 aaKnown RBP15.93■□□□□ 0.14
TRIO-222ENST00000515144 ZHX2Q9Y6X8 837 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 TNNC2P02585 160 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 KRT81Q14533 505 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 PPM1EQ8WY54 764 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 NLRP4Q96MN2 994 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 STK10O94804 968 aaKnown RBP15.93■□□□□ 0.14
TRIO-222ENST00000515144 MAP7D1Q3KQU3 841 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 MTUS1Q9ULD2 1270 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 ATP7BP35670 1465 aa15.93■□□□□ 0.14
TRIO-222ENST00000515144 RYBPQ8N488 228 aaPredicted RBP15.92■□□□□ 0.14
TRIO-222ENST00000515144 ATG3Q9NT62 314 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 SPATA31A3Q5VYP0 1347 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 CUTAO60888 179 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 SLFN12Q8IYM2 578 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 SERPINB13Q9UIV8 391 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 SLC4A1P02730 911 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 ATP2A2P16615 1042 aaKnown RBP15.92■□□□□ 0.14
TRIO-222ENST00000515144 SLFNL1Q499Z3 407 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 CFAP157Q5JU67 520 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 BAG1Q99933 345 aaPredicted RBP15.92■□□□□ 0.14
TRIO-222ENST00000515144 PI4KBQ9UBF8 816 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 ZSCAN20P17040 1043 aaPredicted RBP15.92■□□□□ 0.14
TRIO-222ENST00000515144 LSM14BQ9BX40 385 aaKnown RBP15.92■□□□□ 0.14
TRIO-222ENST00000515144 SWAP70Q9UH65 585 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 AXIN2Q9Y2T1 843 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 MYL5Q02045 173 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 UBE2SQ16763 222 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 KAZNQ674X7 775 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 SLC39A2Q9NP94 309 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 KDM3AQ9Y4C1 1321 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 GRAPQ13588 217 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms