RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 RIC8AQ9NPQ8 531 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 THAP12O43422 761 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 PDE8AO60658 829 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 ADCY8P40145 1251 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 HNRNPH2P55795 449 aaKnown RBP14.61□□□□□ -0.07
TCOF1-214ENST00000515035 DBN1Q16643 649 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 HAUS7Q99871 368 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 PALD1Q9ULE6 856 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 EXOC7Q9UPT5 735 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 ERVV-2B6SEH9 535 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 DAPK3O43293 454 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 GSPT1P15170 499 aaKnown RBP14.61□□□□□ -0.07
TCOF1-214ENST00000515035 CDC25BP30305 580 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 NCAPH2Q6IBW4 605 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 XAB2Q9HCS7 855 aaKnown RBP14.61□□□□□ -0.07
TCOF1-214ENST00000515035 AFG3L2Q9Y4W6 797 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 MYO5CQ9NQX4 1742 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 CLCN6P51797 869 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 ZBTB17Q13105 803 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 DNM3Q9UQ16 869 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 E7EWF7 191 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 EVI5O60447 810 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 PPP2R5CQ13362 524 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 LRRC8CQ8TDW0 803 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 N4BP2L2Q92802 583 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-214ENST00000515035 DDX17Q92841 729 aaKnown RBP14.6□□□□□ -0.07
TCOF1-214ENST00000515035 FAM89AQ96GI7 184 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 VPS54Q9P1Q0 977 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 PCDHA7Q9UN72 937 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 PLEKHG1Q9ULL1 1385 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 FAM170AA1A519 330 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 PHBP35232 272 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 SERPINB6P35237 376 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 RBM26Q5T8P6 1007 aaKnown RBP14.6□□□□□ -0.07
TCOF1-214ENST00000515035 SPATA1Q5VX52 437 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 MORC4Q8TE76 937 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 TMEM94Q12767 1356 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 ENC1O14682 589 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 GCNT3O95395 438 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 GNA14O95837 355 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 ANKRD13CQ8N6S4 541 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 KLHL29Q96CT2 875 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 NDUFB9Q9Y6M9 179 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 PHLPP2Q6ZVD8 1323 aa14.6□□□□□ -0.07
TCOF1-214ENST00000515035 EPHB4P54760 987 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 SLC8A3P57103 927 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 CCDC93Q567U6 631 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 ADAT2Q7Z6V5 191 aaKnown RBP14.59□□□□□ -0.07
TCOF1-214ENST00000515035 JAG2Q9Y219 1238 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 NPHP4O75161 1426 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-214ENST00000515035 hCG_1642624A0A1W2PR95 340 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 H7C1D1 291 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 UFL1O94874 794 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 MX2P20592 715 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 LRRC43Q8N309 656 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 MYCT1Q8N699 235 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 ABCA8O94911 1581 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 SSH2Q76I76 1423 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 PPFIA2O75334 1257 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 ARHGAP4P98171 946 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 CALCRLQ16602 461 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 CAPN12Q6ZSI9 719 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 GRK7Q8WTQ7 553 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 XAGE2Q96GT9 111 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 MRPL44Q9H9J2 332 aaKnown RBP14.59□□□□□ -0.07
TCOF1-214ENST00000515035 TPCN1Q9ULQ1 816 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 EFCAB6Q5THR3 1501 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 ZMYND10O75800 440 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 APBA3O96018 575 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 NDUFA8P51970 172 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 CXorf38Q8TB03 319 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 H0YIN7 160 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 CHL1O00533 1208 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 NOSTRINQ8IVI9 506 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 SCYL3Q8IZE3 742 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 PCDHB13Q9Y5F0 798 aa14.59□□□□□ -0.07
TCOF1-214ENST00000515035 XRCC5P13010 732 aaKnown RBP14.58□□□□□ -0.08
TCOF1-214ENST00000515035 CD19P15391 556 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 TERF2Q15554 542 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 MCTP2Q6DN12 878 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 DNAJC10Q8IXB1 793 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 ZNF274Q96GC6 653 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-214ENST00000515035 GLT8D2Q9H1C3 349 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 THEGQ9P2T0 379 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 GGA1Q9UJY5 639 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 PLXNC1O60486 1568 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 H2AFZP0C0S5 128 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 ITGA6P23229 1130 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 CASP14P31944 242 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 EHHADHQ08426 723 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 RPS6KA2Q15349 733 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 H2AFVQ71UI9 128 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 SUPT20HQ8NEM7 779 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 PARD6BQ9BYG5 372 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 TYW1Q9NV66 732 aaKnown RBP14.58□□□□□ -0.08
TCOF1-214ENST00000515035 MAST3O60307 1309 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 MYO1CO00159 1063 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 SLC12A2P55011 1212 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 CTDSPL2Q05D32 466 aa14.58□□□□□ -0.08
TCOF1-214ENST00000515035 MAEAQ7L5Y9 396 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms