RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 RIOX2Q8IUF8 465 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 TBC1D10CQ8IV04 446 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 GMCL1P1Q8NEA9 526 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 SLF1Q9BQI6 1058 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 CWC22Q9HCG8 908 aaKnown RBP10.35□□□□□ -0.75
HERC4-214ENST00000513996 HMX1Q9NP08 348 aaPredicted RBP10.35□□□□□ -0.75
HERC4-214ENST00000513996 ZNF214Q9UL59 606 aaPredicted RBP10.35□□□□□ -0.75
HERC4-214ENST00000513996 RIPK3Q9Y572 518 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 IVNS1ABPQ9Y6Y0 642 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 TSPY2A6NKD2 308 aa10.34□□□□□ -0.75
HERC4-214ENST00000513996 FARP2O94887 1054 aaPredicted RBP10.34□□□□□ -0.75
HERC4-214ENST00000513996 MCCP23508 829 aa10.34□□□□□ -0.75
HERC4-214ENST00000513996 CYP2C19P33261 490 aa10.34□□□□□ -0.75
HERC4-214ENST00000513996 RRP12Q5JTH9 1297 aaKnown RBP10.34□□□□□ -0.75
HERC4-214ENST00000513996 PRPF38BQ5VTL8 546 aaKnown RBP10.34□□□□□ -0.75
HERC4-214ENST00000513996 LHX8Q68G74 356 aa10.34□□□□□ -0.75
HERC4-214ENST00000513996 TRMT44Q8IYL2 757 aaKnown RBP10.34□□□□□ -0.75
HERC4-214ENST00000513996 PRPF38AQ8NAV1 312 aaKnown RBP10.34□□□□□ -0.75
HERC4-214ENST00000513996 TRPV1Q8NER1 839 aa10.34□□□□□ -0.75
HERC4-214ENST00000513996 DIS3LQ8TF46 1054 aaKnown RBP10.34□□□□□ -0.75
HERC4-214ENST00000513996 MROH8Q9H579 483 aa10.34□□□□□ -0.75
HERC4-214ENST00000513996 DIAPH3Q9NSV4 1193 aa10.34□□□□□ -0.75
HERC4-214ENST00000513996 ZMYM6O95789 1325 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 A0A0G2JMZ2 1700 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 PARP14Q460N5 1801 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 TMEM232C9JQI7 657 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 SLC25A27O95847 323 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 BMP3P12645 472 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 PRAMEF19Q5SWL8 479 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 AKNAD1Q5T1N1 836 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 RCSD1Q6JBY9 416 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 DPP9Q86TI2 863 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 SKAP1Q86WV1 359 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 KIFC2Q96AC6 838 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 PAWRQ96IZ0 340 aaKnown RBP10.33□□□□□ -0.76
HERC4-214ENST00000513996 RAVER2Q9HCJ3 691 aaKnown RBP10.33□□□□□ -0.76
HERC4-214ENST00000513996 TOMM22Q9NS69 142 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 TCP11L1Q9NUJ3 509 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 FEM1BQ9UK73 627 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 OGDHLQ9ULD0 1010 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 SYNPO2Q9UMS6 1093 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 STX8Q9UNK0 236 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 NEDD4P46934 1319 aa10.33□□□□□ -0.76
HERC4-214ENST00000513996 HIP1O00291 1037 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 ATP2A1O14983 1001 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 PGK2P07205 417 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 FCER1AP12319 257 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 CHMLP26374 656 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 MFAP1P55081 439 aaKnown RBP10.32□□□□□ -0.76
HERC4-214ENST00000513996 SNAP25P60880 206 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 MFSD14CQ5VZR4 134 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 OLFML2BQ68BL8 750 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 TTBK2Q6IQ55 1244 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 MFSD6Q6ZSS7 791 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 KCTD1Q719H9 257 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 ABRAQ8N0Z2 381 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 CPXCR1Q8N123 301 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 STAG1Q8WVM7 1258 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 GMCL1Q96IK5 515 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 TMEM47Q9BQJ4 181 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 DSCC1Q9BVC3 393 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 SLC38A10Q9HBR0 1119 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 MTMR7Q9Y216 660 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 MYH4Q9Y623 1939 aa10.32□□□□□ -0.76
HERC4-214ENST00000513996 COL11A1P12107 1806 aaPredicted RBP10.32□□□□□ -0.76
HERC4-214ENST00000513996 ZNF213O14771 459 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 ZBED4O75132 1171 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 CYBAP13498 195 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 SLC1A4P43007 532 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 SLC4A3P48751 1232 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 PTH1RQ03431 593 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 ZNF792Q3KQV3 632 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 SNRNP48Q6IEG0 339 aaKnown RBP10.31□□□□□ -0.76
HERC4-214ENST00000513996 MAML3Q96JK9 1138 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 MMP19Q99542 508 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 ZKSCAN3Q9BRR0 538 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 TEX13BQ9BXU2 312 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 ZNFX1Q9P2E3 1918 aaKnown RBP10.31□□□□□ -0.76
HERC4-214ENST00000513996 ZNF536O15090 1300 aa10.31□□□□□ -0.76
HERC4-214ENST00000513996 DNAJC25-GNG10A0A024R161 153 aa10.3□□□□□ -0.76
HERC4-214ENST00000513996 B4E1Z4 1266 aa10.3□□□□□ -0.76
HERC4-214ENST00000513996 H0YGN5 161 aa10.3□□□□□ -0.76
HERC4-214ENST00000513996 PLA2G6O60733 806 aa10.3□□□□□ -0.76
HERC4-214ENST00000513996 CHRM1P11229 460 aaPredicted RBP10.3□□□□□ -0.76
HERC4-214ENST00000513996 TOP1P11387 765 aaKnown RBP10.3□□□□□ -0.76
HERC4-214ENST00000513996 TAL1P17542 331 aaPredicted RBP10.3□□□□□ -0.76
HERC4-214ENST00000513996 CAPN2P17655 700 aa10.3□□□□□ -0.76
HERC4-214ENST00000513996 SLC16A2P36021 539 aa10.3□□□□□ -0.76
HERC4-214ENST00000513996 CHURC1Q8WUH1 139 aa10.3□□□□□ -0.76
HERC4-214ENST00000513996 DPF3Q92784 378 aa10.3□□□□□ -0.76
HERC4-214ENST00000513996 RNF25Q96BH1 459 aaPredicted RBP10.3□□□□□ -0.76
HERC4-214ENST00000513996 AGBL1Q96MI9 1066 aa10.3□□□□□ -0.76
HERC4-214ENST00000513996 TSPYL2Q9H2G4 693 aaPredicted RBP10.3□□□□□ -0.76
HERC4-214ENST00000513996 KDM4AO75164 1064 aa10.29□□□□□ -0.76
HERC4-214ENST00000513996 PCP11498 1178 aaKnown RBP10.29□□□□□ -0.76
HERC4-214ENST00000513996 CNGA1P29973 690 aa10.29□□□□□ -0.76
HERC4-214ENST00000513996 STAT2P52630 851 aa10.29□□□□□ -0.76
HERC4-214ENST00000513996 KCTD2Q14681 263 aa10.29□□□□□ -0.76
HERC4-214ENST00000513996 PPP4R3BQ5MIZ7 849 aa10.29□□□□□ -0.76
HERC4-214ENST00000513996 ANO1Q5XXA6 986 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms