RNA–Protein interactions for RNA: ENST00000513965.5

COPG1-208, Transcript of coatomer protein complex subunit gamma 1, human

TSL 2

Gene COPG1, Length 730 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPG1-208	ENST00000513965	FAAP100	Q0VG06	881 aa		13.62	□□□□□ -0.23
COPG1-208	ENST00000513965	KCNA10	Q16322	511 aa		13.62	□□□□□ -0.23
COPG1-208	ENST00000513965	REPS2	Q8NFH8	660 aa		13.62	□□□□□ -0.23
COPG1-208	ENST00000513965	KIFC2	Q96AC6	838 aa		13.62	□□□□□ -0.23
COPG1-208	ENST00000513965	STRBP	Q96SI9	672 aa	Known RBP	13.62	□□□□□ -0.23
COPG1-208	ENST00000513965	FAM184B	Q9ULE4	1060 aa		13.62	□□□□□ -0.23
COPG1-208	ENST00000513965	ZBED4	O75132	1171 aa		13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	ADAMTS4	O75173	837 aa		13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	NDUFB10	O96000	172 aa		13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	APP	P05067	770 aa		13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	COPB2	P35606	906 aa		13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	NUP133	Q8WUM0	1156 aa		13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	TEX13B	Q9BXU2	312 aa		13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	LRRCC1	Q9C099	1032 aa		13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	RAVER2	Q9HCJ3	691 aa	Known RBP	13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	ISY1	Q9ULR0	285 aa	Known RBP	13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	SYNRG	Q9UMZ2	1314 aa		13.61	□□□□□ -0.23
COPG1-208	ENST00000513965	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	CUL9	Q8IWT3	2517 aa		13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	MYADML2	A6NDP7	307 aa		13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	GSG1L2	A8MUP6	293 aa		13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	PRDM1	O75626	825 aa		13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	C6orf222	P0C671	652 aa	Predicted RBP	13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	RASA1	P20936	1047 aa		13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	GRIN2C	Q14957	1233 aa		13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	TSHZ3	Q63HK5	1081 aa		13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	ANKRD35	Q8N283	1001 aa		13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	PRPF38A	Q8NAV1	312 aa	Known RBP	13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	TSEN34	Q9BSV6	310 aa	Known RBP	13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	ZBED9	Q6R2W3	1325 aa		13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	LTBP2	Q14767	1821 aa		13.6	□□□□□ -0.23
COPG1-208	ENST00000513965	ZNF236	Q9UL36	1845 aa		13.6	□□□□□ -0.23
COPG1-208	ENST00000513965		A0A0G2JMZ2	1700 aa		13.59	□□□□□ -0.23
COPG1-208	ENST00000513965	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.59	□□□□□ -0.23
COPG1-208	ENST00000513965	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.59	□□□□□ -0.23
COPG1-208	ENST00000513965	ACVR2B	Q13705	512 aa		13.59	□□□□□ -0.23
COPG1-208	ENST00000513965	KLHDC9	Q8NEP7	349 aa		13.59	□□□□□ -0.23
COPG1-208	ENST00000513965	PPM1E	Q8WY54	764 aa		13.59	□□□□□ -0.23
COPG1-208	ENST00000513965	HOMER2	Q9NSB8	354 aa		13.59	□□□□□ -0.23
COPG1-208	ENST00000513965	NYAP2	Q9P242	653 aa		13.59	□□□□□ -0.23
COPG1-208	ENST00000513965	EYS	Q5T1H1	3165 aa		13.59	□□□□□ -0.23
COPG1-208	ENST00000513965	TIMP1	P01033	207 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	TDO2	P48775	406 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	CCDC144B	Q3MJ40	725 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	SBK1	Q52WX2	424 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	GNAS	Q5JWF2	1037 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	CCDC129	Q6ZRS4	1044 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	NOL8	Q76FK4	1167 aa	Known RBP	13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	ANKRD33	Q7Z3H0	272 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	LRRC47	Q8N1G4	583 aa	Known RBP	13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	MSL3	Q8N5Y2	521 aa	Known RBP	13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	OSBP2	Q969R2	916 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	GLT1D1	Q96MS3	346 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	TOX2	Q96NM4	488 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	CHMP4B	Q9H444	224 aa	Known RBP	13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	ECHDC1	Q9NTX5	307 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	SYNGAP1	Q96PV0	1343 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	VCAN	P13611	3396 aa		13.58	□□□□□ -0.24
COPG1-208	ENST00000513965	DNAJC25-GNG10	A0A024R161	153 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	MOXD2P	A6NHM9	499 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	GRXCR1	A8MXD5	290 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	RNF113A	O15541	343 aa	Known RBP	13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	ADCY6	O43306	1168 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	DUSP11	O75319	330 aa	Known RBP	13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	ASGR1	P07306	291 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	ACR	P10323	421 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	DNAJB2	P25686	324 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	C20orf194	Q5TEA3	1177 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	MAMDC4	Q6UXC1	1216 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	CEP95	Q96GE4	821 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	1e-8	■■■■■ 30.7
COPG1-208	ENST00000513965	PPP1R12C	Q9BZL4	782 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	ZNF576	Q9H609	170 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	SPC25	Q9HBM1	224 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	COL11A1	P12107	1806 aa	Predicted RBP	13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	CDH23	Q9H251	3354 aa		13.57	□□□□□ -0.24
COPG1-208	ENST00000513965	MYH8	P13535	1937 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965		M0R2C6	588 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	GPAA1	O43292	621 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	CSF2RA	P15509	400 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	PBX2	P40425	430 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	BEX3	Q00994	111 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	CNTN2	Q02246	1040 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	DIEXF	Q68CQ4	756 aa	Known RBP	13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	SLFN13	Q68D06	897 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	MFSD5	Q6N075	450 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	C16orf59	Q7L2K0	433 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	ARMCX2	Q7L311	632 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	CCDC144CP	Q8IYA2	1237 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	KBTBD3	Q8NAB2	608 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	USP38	Q8NB14	1042 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	PCSK9	Q8NBP7	692 aa	Known RBP	13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	APPBP2	Q92624	585 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	TIFA	Q96CG3	184 aa		13.56	□□□□□ -0.24
COPG1-208	ENST00000513965	SLC38A10	Q9HBR0	1119 aa		13.56	□□□□□ -0.24

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