RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 IL17RBQ9NRM6 502 aa9.64□□□□□ -0.87
NEDD4-210ENST00000513957 FEM1BQ9UK73 627 aa9.64□□□□□ -0.87
NEDD4-210ENST00000513957 PPP1R9AQ9ULJ8 1098 aa9.64□□□□□ -0.87
NEDD4-210ENST00000513957 ADAMTS5Q9UNA0 930 aa9.64□□□□□ -0.87
NEDD4-210ENST00000513957 HTTP42858 3142 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 NEDD4P46934 1319 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 ATP2A1O14983 1001 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 CAPN2P17655 700 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 SLC1A4P43007 532 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 STAT2P52630 851 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 RRP12Q5JTH9 1297 aaKnown RBP9.63□□□□□ -0.87
NEDD4-210ENST00000513957 RALYLQ86SE5 291 aaKnown RBP9.63□□□□□ -0.87
NEDD4-210ENST00000513957 FAM160B2Q86V87 743 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 CCAR1Q8IX12 1150 aaKnown RBP9.63□□□□□ -0.87
NEDD4-210ENST00000513957 SPICE1Q8N0Z3 855 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 LRRC47Q8N1G4 583 aaKnown RBP9.63□□□□□ -0.87
NEDD4-210ENST00000513957 PRPF38AQ8NAV1 312 aaKnown RBP9.63□□□□□ -0.87
NEDD4-210ENST00000513957 SLAIN1Q8ND83 568 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 PXYLP1Q8TE99 480 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 DCAF4Q8WV16 495 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 ANKS1AQ92625 1134 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 SLF1Q9BQI6 1058 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 LSG1Q9H089 658 aaKnown RBP9.63□□□□□ -0.87
NEDD4-210ENST00000513957 RBPJLQ9UBG7 517 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 PNMA2Q9UL42 364 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 HPS5Q9UPZ3 1129 aa9.63□□□□□ -0.87
NEDD4-210ENST00000513957 KDM4AO75164 1064 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 REC8O95072 547 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 SLC25A27O95847 323 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 CYP21A2P08686 494 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 BMP3P12645 472 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 XRCC5P13010 732 aaKnown RBP9.62□□□□□ -0.87
NEDD4-210ENST00000513957 OAZ1P54368 228 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 PTH1RQ03431 593 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 SART3Q15020 963 aaKnown RBP9.62□□□□□ -0.87
NEDD4-210ENST00000513957 KIAA1755Q5JYT7 1200 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 FAM83BQ5T0W9 1011 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 SLFN13Q68D06 897 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 TRMT44Q8IYL2 757 aaKnown RBP9.62□□□□□ -0.87
NEDD4-210ENST00000513957 ABRAQ8N0Z2 381 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 NCOA7Q8NI08 942 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 CHURC1Q8WUH1 139 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 ARMC5Q96C12 935 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 UBAC1Q9BSL1 405 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 SPATC1LQ9H0A9 340 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 MROH8Q9H579 483 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 TXNRD2Q9NNW7 524 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 ANO2Q9NQ90 1003 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 RBM8AQ9Y5S9 174 aaKnown RBP9.62□□□□□ -0.87
NEDD4-210ENST00000513957 TACC3Q9Y6A5 838 aa9.62□□□□□ -0.87
NEDD4-210ENST00000513957 CENPFP49454 3210 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 ERICH2A1L162 156 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 B4E1Z4 1266 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 VWA5AO00534 786 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 STRNO43815 780 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 CNMDO75829 334 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 SNHG28P0DPA3 235 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 CTGFP29279 349 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
NEDD4-210ENST00000513957 NECTIN1Q15223 517 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 SLC9C1Q4G0N8 1177 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 GPATCH4Q5T3I0 446 aaKnown RBP9.61□□□□□ -0.87
NEDD4-210ENST00000513957 IFFO2Q5TF58 517 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 GPR142Q7Z601 462 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 RAET1EQ8TD07 263 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
NEDD4-210ENST00000513957 NUDT12Q9BQG2 462 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 PAGR1Q9BTK6 254 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 TEX13BQ9BXU2 312 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 ARHGAP39Q9C0H5 1083 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 ZSWIM5Q9P217 1185 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 IVNS1ABPQ9Y6Y0 642 aa9.61□□□□□ -0.87
NEDD4-210ENST00000513957 TNKSO95271 1327 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 SLC15A5A6NIM6 579 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 E7EWF7 191 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 NMT2O60551 498 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 ZBED4O75132 1171 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 PDHBP11177 359 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 ZKSCAN1P17029 563 aaPredicted RBP9.6□□□□□ -0.87
NEDD4-210ENST00000513957 RGS2P41220 211 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 FLT3LGP49771 235 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 CAP1Q01518 475 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 PRKCZQ05513 592 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 KRT32Q14532 448 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 TSGA10IPQ3SY00 556 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 BTNL9Q6UXG8 535 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 PLEKHH3Q7Z736 793 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 RIOX2Q8IUF8 465 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 REPS2Q8NFH8 660 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 ATG4CQ96DT6 458 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 TMEM47Q9BQJ4 181 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 CRISPLD2Q9H0B8 497 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 KAT14Q9H8E8 782 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 SLC38A10Q9HBR0 1119 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 CWC22Q9HCG8 908 aaKnown RBP9.6□□□□□ -0.87
NEDD4-210ENST00000513957 INCENPQ9NQS7 918 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 SLC5A4Q9NY91 659 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 BTBD7Q9P203 1132 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 ZNF214Q9UL59 606 aaPredicted RBP9.6□□□□□ -0.87
NEDD4-210ENST00000513957 PTCH2Q9Y6C5 1203 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms