RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 PRNPP04156 253 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 CEACAM5P06731 702 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 ZNF865P0CJ78 1059 aaPredicted RBP6.36□□□□□ -1.39
CLDND1-228ENST00000513873 KIR3DL1P43629 444 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 HRASLS5Q96KN8 279 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 ACBD3Q9H3P7 528 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 KCNH3Q9ULD8 1083 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 EFR3BQ9Y2G0 817 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 SETD1AO15047 1707 aaKnown RBP6.36□□□□□ -1.39
CLDND1-228ENST00000513873 MROH2AA6NES4 1674 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 REREQ9P2R6 1566 aa6.35□□□□□ -1.39
CLDND1-228ENST00000513873 MYOM3Q5VTT5 1437 aa6.35□□□□□ -1.39
CLDND1-228ENST00000513873 SCAPERQ9BY12 1400 aa6.35□□□□□ -1.39
CLDND1-228ENST00000513873 KRTAP9-7A8MTY7 169 aa6.35□□□□□ -1.39
CLDND1-228ENST00000513873 B8ZZF3 427 aa6.35□□□□□ -1.39
CLDND1-228ENST00000513873 OXCT1P55809 520 aa6.35□□□□□ -1.39
CLDND1-228ENST00000513873 PLD6Q8N2A8 252 aaKnown RBP6.35□□□□□ -1.39
CLDND1-228ENST00000513873 MFSD4AQ8N468 514 aa6.35□□□□□ -1.39
CLDND1-228ENST00000513873 RIN3Q8TB24 985 aa6.35□□□□□ -1.39
CLDND1-228ENST00000513873 HEXIM2Q96MH2 286 aaKnown RBP6.35□□□□□ -1.39
CLDND1-228ENST00000513873 KIF2CQ99661 725 aa6.35□□□□□ -1.39
CLDND1-228ENST00000513873 CFDP1Q9UEE9 299 aaPredicted RBP6.35□□□□□ -1.39
CLDND1-228ENST00000513873 SLC5A6Q9Y289 635 aa6.35□□□□□ -1.39
CLDND1-228ENST00000513873 SNX11Q9Y5W9 270 aa6.35□□□□□ -1.39
CLDND1-228ENST00000513873 NCOA2Q15596 1464 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 SHANK2Q9UPX8 1470 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 TROQ12816 1431 aaPredicted RBP6.34□□□□□ -1.39
CLDND1-228ENST00000513873 FGD6Q6ZV73 1430 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 RGS13O14921 159 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 RAD51AP2Q09MP3 1159 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 MSMPQ1L6U9 139 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 CDKAL1Q5VV42 579 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 OVOS1Q6IE37 1185 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 NLRC3Q7RTR2 1065 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 FLCNQ8NFG4 579 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 BAHD1Q8TBE0 780 aaPredicted RBP6.34□□□□□ -1.39
CLDND1-228ENST00000513873 TMEM40Q8WWA1 233 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 SEC16BQ96JE7 1060 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.34□□□□□ -1.39
CLDND1-228ENST00000513873 ASCC2Q9H1I8 757 aaPredicted RBP6.34□□□□□ -1.39
CLDND1-228ENST00000513873 GINM1Q9NU53 330 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 VAV3Q9UKW4 847 aa6.34□□□□□ -1.39
CLDND1-228ENST00000513873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.34□□□□□ -1.39
CLDND1-228ENST00000513873 NUP153P49790 1475 aaKnown RBP6.34□□□□□ -1.4
CLDND1-228ENST00000513873 RAPGEF6Q8TEU7 1601 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 CCNFP41002 786 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 GJA8P48165 433 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 CLCN7P51798 805 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 EIF6P56537 245 aaKnown RBP6.33□□□□□ -1.4
CLDND1-228ENST00000513873 RNF4P78317 190 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 PRKCQQ04759 706 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 AOC3Q16853 763 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 CDCP2Q5VXM1 449 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 FAM214BQ7L5A3 538 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 RASGRP4Q8TDF6 673 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 ASB11Q8WXH4 323 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 ATG4CQ96DT6 458 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 DHRS1Q96LJ7 313 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 CNNM2Q9H8M5 875 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 ZNRF3Q9ULT6 936 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 PPT2Q9UMR5 302 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 SETD5Q9C0A6 1442 aa6.33□□□□□ -1.4
CLDND1-228ENST00000513873 NME1P15531 152 aaKnown RBP6.32□□□□□ -1.4
CLDND1-228ENST00000513873 NASPP49321 788 aaPredicted RBP6.32□□□□□ -1.4
CLDND1-228ENST00000513873 C22orf34Q6ZV56 151 aa6.32□□□□□ -1.4
CLDND1-228ENST00000513873 DNAJB8Q8NHS0 232 aa6.32□□□□□ -1.4
CLDND1-228ENST00000513873 RNF141Q8WVD5 230 aa6.32□□□□□ -1.4
CLDND1-228ENST00000513873 TM9SF2Q99805 663 aa6.32□□□□□ -1.4
CLDND1-228ENST00000513873 ASPNQ9BXN1 380 aa6.32□□□□□ -1.4
CLDND1-228ENST00000513873 SRRTQ9BXP5 876 aaKnown RBP6.32□□□□□ -1.4
CLDND1-228ENST00000513873 STRIP2Q9ULQ0 834 aa6.32□□□□□ -1.4
CLDND1-228ENST00000513873 POLR1AO95602 1720 aaPredicted RBP6.32□□□□□ -1.4
CLDND1-228ENST00000513873 ZNF518AQ6AHZ1 1483 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 MEIS3P2A8K0S8 358 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 DNAJA2O60884 412 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 CLEC3AO75596 197 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 SSBP05455 408 aaKnown RBP eCLIP6.31□□□□□ -1.4
CLDND1-228ENST00000513873 TSPY4P0CV99 314 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 TSPY10P0CW01 314 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 SOX9P48436 509 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 OR6P1Q8NGX9 317 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 PIWIL2Q8TC59 973 aaKnown RBP6.31□□□□□ -1.4
CLDND1-228ENST00000513873 KREMEN1Q96MU8 473 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 TRIT1Q9H3H1 467 aaKnown RBP6.31□□□□□ -1.4
CLDND1-228ENST00000513873 MYO3AQ8NEV4 1616 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 PLCH2O75038 1416 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 KDM5CP41229 1560 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 DIP2CQ9Y2E4 1556 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 CEP170BQ9Y4F5 1589 aaPredicted RBP6.31□□□□□ -1.4
CLDND1-228ENST00000513873 ZMYM3Q14202 1370 aa6.31□□□□□ -1.4
CLDND1-228ENST00000513873 CLEC16AQ2KHT3 1053 aa6.3□□□□□ -1.4
CLDND1-228ENST00000513873 INTS3Q68E01 1043 aaKnown RBP6.3□□□□□ -1.4
CLDND1-228ENST00000513873 CCDC81Q6ZN84 652 aa6.3□□□□□ -1.4
CLDND1-228ENST00000513873 SPACA3Q8IXA5 215 aa6.3□□□□□ -1.4
CLDND1-228ENST00000513873 PPP1R13LQ8WUF5 828 aa6.3□□□□□ -1.4
CLDND1-228ENST00000513873 BCL7CQ8WUZ0 217 aaPredicted RBP6.3□□□□□ -1.4
CLDND1-228ENST00000513873 HSPA12BQ96MM6 686 aa6.3□□□□□ -1.4
CLDND1-228ENST00000513873 TOX2Q96NM4 488 aa6.3□□□□□ -1.4
CLDND1-228ENST00000513873 TNKS2Q9H2K2 1166 aa6.3□□□□□ -1.4
CLDND1-228ENST00000513873 ANTXR1Q9H6X2 564 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms