RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 E9PCH4 1651 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 ACTN4O43707 911 aaKnown RBP8.59□□□□□ -1.03
CLCN3-209ENST00000513761 MOCS3O95396 460 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 CCDC174Q6PII3 467 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 NYAP1Q6ZVC0 841 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 TBC1D31Q96DN5 1066 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 RIPOR2Q9Y4F9 1068 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 SRPRBQ9Y5M8 271 aaKnown RBP8.59□□□□□ -1.03
CLCN3-209ENST00000513761 SCG2P13521 617 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 MXRA7P84157 204 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 ATP11AP98196 1134 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 E2F5Q15329 346 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 CALCRLQ16602 461 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 SEL1L2Q5TEA6 688 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 ICE2Q659A1 982 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 SHC4Q6S5L8 630 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 NKIRAS1Q9NYS0 192 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 MTUS1Q9ULD2 1270 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 IKBKGQ9Y6K9 419 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 MLH3Q9UHC1 1453 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 KRIT1O00522 736 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 SPOPO43791 374 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 EPB41P11171 864 aaKnown RBP8.59□□□□□ -1.03
CLCN3-209ENST00000513761 TNFAIP3P21580 790 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 PCK1P35558 622 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 POLR2FP61218 127 aaKnown RBP8.59□□□□□ -1.03
CLCN3-209ENST00000513761 UBE3CQ15386 1083 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 GPR108Q9NPR9 543 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 HEXIM1O94992 359 aaKnown RBP8.58□□□□□ -1.04
CLCN3-209ENST00000513761 HLA-DOAP06340 250 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 ADD2P35612 726 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 PLCB3Q01970 1234 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 NAA35Q5VZE5 725 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 CADPS2Q86UW7 1296 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 HDAC6Q9UBN7 1215 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 BIN2Q9UBW5 565 aaPredicted RBP8.58□□□□□ -1.04
CLCN3-209ENST00000513761 ADGRG1Q9Y653 693 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 RPSAP08865 295 aaKnown RBP8.58□□□□□ -1.04
CLCN3-209ENST00000513761 RPL13P26373 211 aaKnown RBP8.58□□□□□ -1.04
CLCN3-209ENST00000513761 C6orf163Q5TEZ5 329 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 IFT74Q96LB3 600 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 ARHGEF40Q8TER5 1519 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 CLTAP09496 248 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 IFNAR1P17181 557 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 GGCXP38435 758 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 EPHB4P54760 987 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 NNTQ13423 1086 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 NHEJ1Q9H9Q4 299 aaPredicted RBP8.58□□□□□ -1.04
CLCN3-209ENST00000513761 ABCB4P21439 1286 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 MTMR3Q13615 1198 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 KRT25Q7Z3Z0 450 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 NAP1L3Q99457 506 aaPredicted RBP8.58□□□□□ -1.04
CLCN3-209ENST00000513761 HOMER2Q9NSB8 354 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 MROH5Q6ZUA9 1318 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 RNF17Q9BXT8 1623 aaKnown RBP8.58□□□□□ -1.04
CLCN3-209ENST00000513761 SPDYE3A6NKU9 549 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 GOLGA8HP0CJ92 632 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 VSNL1P62760 191 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 PDCLQ13371 301 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 TADA2BQ86TJ2 420 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 KSR1Q8IVT5 923 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 ANKRD42Q8N9B4 389 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 MICAL1Q8TDZ2 1067 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
CLCN3-209ENST00000513761 FLOT1O75955 427 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 GYG1P46976 350 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 GKAP1Q5VSY0 366 aaPredicted RBP8.57□□□□□ -1.04
CLCN3-209ENST00000513761 DENND2CQ68D51 928 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 ZNF219Q9P2Y4 722 aaPredicted RBP8.57□□□□□ -1.04
CLCN3-209ENST00000513761 GDAQ9Y2T3 454 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 REREQ9P2R6 1566 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 ZNF658Q5TYW1 1059 aaPredicted RBP8.57□□□□□ -1.04
CLCN3-209ENST00000513761 ABHD10Q9NUJ1 306 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 SMCO2A6NFE2 343 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 RGS16O15492 202 aaPredicted RBP8.57□□□□□ -1.04
CLCN3-209ENST00000513761 FTCDO95954 541 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 TCP11X2Q5H9J9 407 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 CYB5R4Q7L1T6 521 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 TBC1D10CQ8IV04 446 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 ZBTB38Q8NAP3 1195 aaPredicted RBP8.57□□□□□ -1.04
CLCN3-209ENST00000513761 PPP1R14CQ8TAE6 165 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 U2AF1L4Q8WU68 220 aaKnown RBP8.57□□□□□ -1.04
CLCN3-209ENST00000513761 BICD1Q96G01 975 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 PPP1R12CQ9BZL4 782 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 TRIM7Q9C029 511 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 CTTNBP2NLQ9P2B4 639 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 CIAO1O76071 339 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 PDE8BO95263 885 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 PTPREP23469 700 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 ARHGEF25Q86VW2 580 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 VSIG1Q86XK7 387 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 CCDC24Q8N4L8 307 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 RNF26Q9BY78 433 aaPredicted RBP8.57□□□□□ -1.04
CLCN3-209ENST00000513761 IQCGQ9H095 443 aaKnown RBP8.57□□□□□ -1.04
CLCN3-209ENST00000513761 RWDD2AQ9UIY3 292 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 CDC27P30260 824 aa8.57□□□□□ -1.04
CLCN3-209ENST00000513761 HIBADHP31937 336 aaKnown RBP8.57□□□□□ -1.04
CLCN3-209ENST00000513761 ALDH8A1Q9H2A2 487 aaPredicted RBP8.57□□□□□ -1.04
CLCN3-209ENST00000513761 CRB1P82279 1406 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms