RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 MB21D1Q8N884 522 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 DPF3Q92784 378 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 TANGO6Q9C0B7 1094 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 KANSL2Q9H9L4 492 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 CWC22Q9HCG8 908 aaKnown RBP11.75□□□□□ -0.53
CCL28-203ENST00000513525 CACNB2Q08289 660 aaPredicted RBP11.74□□□□□ -0.53
CCL28-203ENST00000513525 CCL14Q16627 93 aa11.74□□□□□ -0.53
CCL28-203ENST00000513525 SHCBP1Q8NEM2 672 aa11.74□□□□□ -0.53
CCL28-203ENST00000513525 EPB41L4AQ9HCS5 686 aaPredicted RBP11.74□□□□□ -0.53
CCL28-203ENST00000513525 OGDHLQ9ULD0 1010 aa11.74□□□□□ -0.53
CCL28-203ENST00000513525 IVNS1ABPQ9Y6Y0 642 aa11.74□□□□□ -0.53
CCL28-203ENST00000513525 MCM3APO60318 1980 aa11.73□□□□□ -0.53
CCL28-203ENST00000513525 EEF2P13639 858 aaKnown RBP11.73□□□□□ -0.53
CCL28-203ENST00000513525 MX1P20591 662 aa11.73□□□□□ -0.53
CCL28-203ENST00000513525 RASA1P20936 1047 aa11.73□□□□□ -0.53
CCL28-203ENST00000513525 NECAB2Q7Z6G3 386 aa11.73□□□□□ -0.53
CCL28-203ENST00000513525 OTUD7AQ8TE49 926 aaPredicted RBP11.73□□□□□ -0.53
CCL28-203ENST00000513525 PAWRQ96IZ0 340 aaKnown RBP11.73□□□□□ -0.53
CCL28-203ENST00000513525 MOV10L1Q9BXT6 1211 aaKnown RBP11.73□□□□□ -0.53
CCL28-203ENST00000513525 MFRPQ9BY79 579 aa11.73□□□□□ -0.53
CCL28-203ENST00000513525 SPATC1LQ9H0A9 340 aa11.73□□□□□ -0.53
CCL28-203ENST00000513525 NR2E3Q9Y5X4 410 aa11.73□□□□□ -0.53
CCL28-203ENST00000513525 LAMA4Q16363 1823 aa11.73□□□□□ -0.53
CCL28-203ENST00000513525 M0R2C6 588 aa11.72□□□□□ -0.53
CCL28-203ENST00000513525 STRNO43815 780 aa11.72□□□□□ -0.53
CCL28-203ENST00000513525 FLOT1O75955 427 aa11.72□□□□□ -0.53
CCL28-203ENST00000513525 IGHA2P01877 340 aa11.72□□□□□ -0.53
CCL28-203ENST00000513525 ANKRD45Q5TZF3 282 aa11.72□□□□□ -0.53
CCL28-203ENST00000513525 WDR78Q5VTH9 848 aa11.72□□□□□ -0.53
CCL28-203ENST00000513525 ANP32EQ9BTT0 268 aa11.72□□□□□ -0.53
CCL28-203ENST00000513525 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCL28-203ENST00000513525 UPF2Q9HAU5 1272 aaKnown RBP11.72□□□□□ -0.53
CCL28-203ENST00000513525 GOPCQ9HD26 462 aa11.72□□□□□ -0.53
CCL28-203ENST00000513525 ADAMTS5Q9UNA0 930 aa11.72□□□□□ -0.53
CCL28-203ENST00000513525 DNAH12Q6ZR08 3092 aa11.72□□□□□ -0.53
CCL28-203ENST00000513525 PLIN4Q96Q06 1357 aa11.71□□□□□ -0.53
CCL28-203ENST00000513525 PATL2C9JE40 543 aaKnown RBP11.71□□□□□ -0.53
CCL28-203ENST00000513525 TDO2P48775 406 aa11.71□□□□□ -0.53
CCL28-203ENST00000513525 BMP2KLQ5H9B9 411 aa11.71□□□□□ -0.53
CCL28-203ENST00000513525 ZMYM1Q5SVZ6 1142 aa11.71□□□□□ -0.53
CCL28-203ENST00000513525 SPICE1Q8N0Z3 855 aa11.71□□□□□ -0.53
CCL28-203ENST00000513525 DIS3LQ8TF46 1054 aaKnown RBP11.71□□□□□ -0.53
CCL28-203ENST00000513525 ATG4CQ96DT6 458 aa11.71□□□□□ -0.53
CCL28-203ENST00000513525 FSD1Q9BTV5 496 aa11.71□□□□□ -0.53
CCL28-203ENST00000513525 LNPKQ9C0E8 428 aa11.71□□□□□ -0.53
CCL28-203ENST00000513525 ZNF287Q9HBT7 754 aa11.71□□□□□ -0.53
CCL28-203ENST00000513525 FLRT1Q9NZU1 646 aa11.71□□□□□ -0.53
CCL28-203ENST00000513525 NYAP2Q9P242 653 aa11.71□□□□□ -0.53
CCL28-203ENST00000513525 SZT2Q5T011 3432 aa11.71□□□□□ -0.54
CCL28-203ENST00000513525 MINDY4BA8MYZ0 360 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 EVI5O60447 810 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 ERCC3P19447 782 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 CCND3P30281 292 aaPredicted RBP11.7□□□□□ -0.54
CCL28-203ENST00000513525 MFSD14CQ5VZR4 134 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 IFNL3Q8IZI9 196 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 ABRAQ8N0Z2 381 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 NPLOC4Q8TAT6 608 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 SEC62Q99442 399 aaKnown RBP11.7□□□□□ -0.54
CCL28-203ENST00000513525 NBPF3Q9H094 633 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 MROH8Q9H579 483 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 MKNK2Q9HBH9 465 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 STAP2Q9UGK3 403 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 IGKV6D-41A0A0C4DH26 115 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 EIF5BO60841 1220 aaKnown RBP11.7□□□□□ -0.54
CCL28-203ENST00000513525 SLC25A27O95847 323 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 ADORA2AP29274 412 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 FXR1P51114 621 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCL28-203ENST00000513525 ATP2B2Q01814 1243 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 OLFML2BQ68BL8 750 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 NACAP1Q9BZK3 213 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 PRO3102Q9H379 93 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 SYNPO2Q9UMS6 1093 aa11.7□□□□□ -0.54
CCL28-203ENST00000513525 PFASO15067 1338 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 MSCO60682 206 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 APPP05067 770 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 COL6A1P12109 1028 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 TMEM132BQ14DG7 1078 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 DPP9Q86TI2 863 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 TICAM2Q86XR7 235 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 RIOX2Q8IUF8 465 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 ZNF444Q8N0Y2 327 aaPredicted RBP11.69□□□□□ -0.54
CCL28-203ENST00000513525 C11orf49Q9H6J7 331 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 FBXO28Q9NVF7 368 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 PPP1R9AQ9ULJ8 1098 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 LTBP2Q14767 1821 aa11.69□□□□□ -0.54
CCL28-203ENST00000513525 VWA5AO00534 786 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 CYBAP13498 195 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 PDE1AP54750 535 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 PLS1Q14651 629 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 FAM83BQ5T0W9 1011 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 NCAPG2Q86XI2 1143 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 STK11IPQ8N1F8 1099 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 REPS2Q8NFH8 660 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 MKL1Q969V6 931 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 EVI5LQ96CN4 794 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 NAPBQ9H115 298 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 SLC5A4Q9NY91 659 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 DDX20Q9UHI6 824 aaKnown RBP11.68□□□□□ -0.54
CCL28-203ENST00000513525 ZNF214Q9UL59 606 aaPredicted RBP11.68□□□□□ -0.54
CCL28-203ENST00000513525 LAMA3Q16787 3333 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms