RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 OTOP2Q7RTS6 562 aa12.74□□□□□ -0.37
CLDND1-227ENST00000513452 FAM126BQ8IXS8 530 aa12.74□□□□□ -0.37
CLDND1-227ENST00000513452 PCSK9Q8NBP7 692 aaKnown RBP12.74□□□□□ -0.37
CLDND1-227ENST00000513452 RIOK1Q9BRS2 568 aaKnown RBP12.74□□□□□ -0.37
CLDND1-227ENST00000513452 SH2D4AQ9H788 454 aa12.74□□□□□ -0.37
CLDND1-227ENST00000513452 VCPKMTQ9H867 229 aa12.74□□□□□ -0.37
CLDND1-227ENST00000513452 FBXO28Q9NVF7 368 aa12.74□□□□□ -0.37
CLDND1-227ENST00000513452 MCM9Q9NXL9 1143 aa12.74□□□□□ -0.37
CLDND1-227ENST00000513452 TMX2Q9Y320 296 aa12.74□□□□□ -0.37
CLDND1-227ENST00000513452 PIEZO1Q92508 2521 aa12.73□□□□□ -0.37
CLDND1-227ENST00000513452 CHD7Q9P2D1 2997 aa12.73□□□□□ -0.37
CLDND1-227ENST00000513452 ZNFX1Q9P2E3 1918 aaKnown RBP12.73□□□□□ -0.37
CLDND1-227ENST00000513452 ARVCFO00192 962 aa12.73□□□□□ -0.37
CLDND1-227ENST00000513452 ERC2O15083 957 aa12.73□□□□□ -0.37
CLDND1-227ENST00000513452 DUSP11O75319 330 aaKnown RBP12.73□□□□□ -0.37
CLDND1-227ENST00000513452 FGBP02675 491 aa12.73□□□□□ -0.37
CLDND1-227ENST00000513452 CYP2D6P10635 497 aa12.73□□□□□ -0.37
CLDND1-227ENST00000513452 MYOGP15173 224 aa12.73□□□□□ -0.37
CLDND1-227ENST00000513452 STAT3P40763 770 aa12.73□□□□□ -0.37
CLDND1-227ENST00000513452 ANTXR1Q9H6X2 564 aa12.73□□□□□ -0.37
CLDND1-227ENST00000513452 UMODL1Q5DID0 1318 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 MAGEB6P1A0A0J9YX57 407 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 FAM86C2PA6NEL3 165 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 VWA5AO00534 786 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 ADCY6O43306 1168 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 RAD21O60216 631 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 SNAI1O95863 264 aaPredicted RBP12.72□□□□□ -0.37
CLDND1-227ENST00000513452 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
CLDND1-227ENST00000513452 AKR1B1P15121 316 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 COPB2P35606 906 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 SIAH1Q8IUQ4 282 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 MSL3Q8N5Y2 521 aaKnown RBP12.72□□□□□ -0.37
CLDND1-227ENST00000513452 DYNLL2Q96FJ2 89 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 CRNKL1Q9BZJ0 848 aaKnown RBP12.72□□□□□ -0.37
CLDND1-227ENST00000513452 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
CLDND1-227ENST00000513452 HIPK3Q9H422 1215 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 SPC25Q9HBM1 224 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 ZNF214Q9UL59 606 aaPredicted RBP12.72□□□□□ -0.37
CLDND1-227ENST00000513452 ADAMTS5Q9UNA0 930 aa12.72□□□□□ -0.37
CLDND1-227ENST00000513452 LRRC37A2A6NM11 1700 aa12.71□□□□□ -0.37
CLDND1-227ENST00000513452 GNASQ5JWF2 1037 aa12.71□□□□□ -0.37
CLDND1-227ENST00000513452 SDR42E1Q8WUS8 393 aa12.71□□□□□ -0.37
CLDND1-227ENST00000513452 UPF3AQ9H1J1 476 aaKnown RBP12.71□□□□□ -0.37
CLDND1-227ENST00000513452 PPP1R9AQ9ULJ8 1098 aa12.71□□□□□ -0.37
CLDND1-227ENST00000513452 SLC4A7Q9Y6M7 1214 aa12.71□□□□□ -0.37
CLDND1-227ENST00000513452 REV3LO60673 3130 aa12.71□□□□□ -0.38
CLDND1-227ENST00000513452 ZBBXA8MT70 800 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 RFXAPO00287 272 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 GTPBP6O43824 516 aaPredicted RBP12.7□□□□□ -0.38
CLDND1-227ENST00000513452 SURF6O75683 361 aaKnown RBP12.7□□□□□ -0.38
CLDND1-227ENST00000513452 CD4P01730 458 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 RARSP54136 660 aaKnown RBP12.7□□□□□ -0.38
CLDND1-227ENST00000513452 CCL23P55773 120 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 GJA9P57773 515 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 ACVR2BQ13705 512 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 POLA2Q14181 598 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 CCDC144BQ3MJ40 725 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 FAM83BQ5T0W9 1011 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 SNRNP48Q6IEG0 339 aaKnown RBP12.7□□□□□ -0.38
CLDND1-227ENST00000513452 MAMDC4Q6UXC1 1216 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 REPS2Q8NFH8 660 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 ARHGAP45Q92619 1136 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 KHSRPQ92945 711 aaKnown RBP eCLIP12.7□□□□□ -0.382e-6■■■□□ 15
CLDND1-227ENST00000513452 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 DCP1AQ9NPI6 582 aaPredicted RBP12.7□□□□□ -0.38
CLDND1-227ENST00000513452 C11orf16Q9NQ32 467 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.7□□□□□ -0.38
CLDND1-227ENST00000513452 SWAP70Q9UH65 585 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 TNNQ9UQP3 1299 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 PCDHA11Q9Y5I1 949 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 MTCH2Q9Y6C9 303 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 MUC6Q6W4X9 2439 aa12.7□□□□□ -0.38
CLDND1-227ENST00000513452 DNAJC25-GNG10A0A024R161 153 aa12.69□□□□□ -0.38
CLDND1-227ENST00000513452 ATP2A2P16615 1042 aaKnown RBP12.69□□□□□ -0.38
CLDND1-227ENST00000513452 SLC4A3P48751 1232 aa12.69□□□□□ -0.38
CLDND1-227ENST00000513452 BEX3Q00994 111 aa12.69□□□□□ -0.38
CLDND1-227ENST00000513452 KRT40Q6A162 431 aa12.69□□□□□ -0.38
CLDND1-227ENST00000513452 TMED8Q6PL24 325 aaPredicted RBP12.69□□□□□ -0.38
CLDND1-227ENST00000513452 ALYREFQ86V81 257 aaKnown RBP12.69□□□□□ -0.38
CLDND1-227ENST00000513452 EAF2Q96CJ1 260 aaPredicted RBP12.69□□□□□ -0.38
CLDND1-227ENST00000513452 TEX13BQ9BXU2 312 aa12.69□□□□□ -0.38
CLDND1-227ENST00000513452 CERS4Q9HA82 394 aa12.69□□□□□ -0.38
CLDND1-227ENST00000513452 MYH8P13535 1937 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 PRRC2BQ5JSZ5 2229 aaKnown RBP12.68□□□□□ -0.38
CLDND1-227ENST00000513452 CTAGE5O15320 804 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 TLL1O43897 1013 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 GPR37L1O60883 481 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 BCAR3O75815 825 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 CA3P07451 260 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 EEF2P13639 858 aaKnown RBP12.68□□□□□ -0.38
CLDND1-227ENST00000513452 TRIM27P14373 513 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 PDE6AP16499 860 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 CXCL17Q6UXB2 119 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 TRMT2AQ8IZ69 625 aaKnown RBP12.68□□□□□ -0.38
CLDND1-227ENST00000513452 LCORLQ8N3X6 602 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 SSH3Q8TE77 659 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 NOC4LQ9BVI4 516 aaKnown RBP12.68□□□□□ -0.38
CLDND1-227ENST00000513452 WNT8AQ9H1J5 351 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 GOPCQ9HD26 462 aa12.68□□□□□ -0.38
CLDND1-227ENST00000513452 COG5Q9UP83 839 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms