RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 A0A0G2JMZ2 1700 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 MCM4P33991 863 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 SLC16A2P36021 539 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 GCLCP48506 637 aaPredicted RBP19.22■□□□□ 0.67
HMGCL-209ENST00000513148 ZNF543Q08ER8 600 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 CATIPQ7Z7H3 387 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 ZNF654Q8IZM8 581 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 ZSWIM6Q9HCJ5 1215 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 FEM1BQ9UK73 627 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 SNHG28P0DPA3 235 aa19.21■□□□□ 0.67
HMGCL-209ENST00000513148 BCRP11274 1271 aa19.21■□□□□ 0.67
HMGCL-209ENST00000513148 RXRAP19793 462 aa19.21■□□□□ 0.67
HMGCL-209ENST00000513148 TERF1P54274 439 aa19.21■□□□□ 0.67
HMGCL-209ENST00000513148 SP3Q02447 781 aa19.21■□□□□ 0.67
HMGCL-209ENST00000513148 RBPJLQ9UBG7 517 aa19.21■□□□□ 0.67
HMGCL-209ENST00000513148 ESPNB1AK53 854 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 PARP1P09874 1014 aaKnown RBP19.2■□□□□ 0.66
HMGCL-209ENST00000513148 LIFRP42702 1097 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 TM6SF1Q9BZW5 370 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 CPVLQ9H3G5 476 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 BTBD7Q9P203 1132 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 NAP1L2Q9ULW6 460 aaPredicted RBP19.2■□□□□ 0.66
HMGCL-209ENST00000513148 FKTNO75072 461 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 PLS1Q14651 629 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 FAM110CQ1W6H9 321 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 CCDC144CPQ8IYA2 1237 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 TMTC2Q8N394 836 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 PRPF38AQ8NAV1 312 aaKnown RBP19.2■□□□□ 0.66
HMGCL-209ENST00000513148 CHURC1Q8WUH1 139 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 BRF1Q92994 677 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 SLC12A7Q9Y666 1083 aa19.2■□□□□ 0.66
HMGCL-209ENST00000513148 MYPNQ86TC9 1320 aa19.19■□□□□ 0.66
HMGCL-209ENST00000513148 VWA5AO00534 786 aa19.19■□□□□ 0.66
HMGCL-209ENST00000513148 TROAPQ12815 778 aa19.19■□□□□ 0.66
HMGCL-209ENST00000513148 FAM160B2Q86V87 743 aa19.19■□□□□ 0.66
HMGCL-209ENST00000513148 MICU3Q86XE3 530 aa19.19■□□□□ 0.66
HMGCL-209ENST00000513148 STAG2Q8N3U4 1231 aa19.19■□□□□ 0.66
HMGCL-209ENST00000513148 CD99L2Q8TCZ2 262 aa19.19■□□□□ 0.66
HMGCL-209ENST00000513148 GTF3C2Q8WUA4 911 aaPredicted RBP19.19■□□□□ 0.66
HMGCL-209ENST00000513148 CNMDO75829 334 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 SNAP25P60880 206 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 ERVK-9P63128 1117 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 ERVK-24P63145 666 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 APOBRQ0VD83 1088 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 Q3C1V9 767 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 ASPRV1Q53RT3 343 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 GPATCH4Q5T3I0 446 aaKnown RBP19.18■□□□□ 0.66
HMGCL-209ENST00000513148 LBX2Q6XYB7 198 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 SGMS1Q86VZ5 419 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 GPRC5AQ8NFJ5 357 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 ARHGAP39Q9C0H5 1083 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 UBA5Q9GZZ9 404 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 RABGAP1Q9Y3P9 1069 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 CTDP1Q9Y5B0 961 aaPredicted RBP19.18■□□□□ 0.66
HMGCL-209ENST00000513148 KLF18A0A0U1RQI7 1052 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 LACTBP83111 547 aaPredicted RBP19.18■□□□□ 0.66
HMGCL-209ENST00000513148 LARP6Q9BRS8 491 aaKnown RBP19.18■□□□□ 0.66
HMGCL-209ENST00000513148 PDRG1Q9NUG6 133 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 MAD2L2Q9UI95 211 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 PRR12Q9ULL5 1215 aa19.18■□□□□ 0.66
HMGCL-209ENST00000513148 MGAMO43451 1857 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 DDAH1O94760 285 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 GRM4Q14833 912 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 TMEM132BQ14DG7 1078 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 NOM1Q5C9Z4 860 aaKnown RBP19.17■□□□□ 0.66
HMGCL-209ENST00000513148 SYDE2Q5VT97 1194 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 APOA5Q6Q788 366 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 SYNE3Q6ZMZ3 975 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 TBC1D32Q96NH3 1257 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 MORF4L1Q9UBU8 362 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 DHX16O60231 1041 aaKnown RBP19.17■□□□□ 0.66
HMGCL-209ENST00000513148 CAP1Q01518 475 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 CPXCR1Q8N123 301 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 MB21D1Q8N884 522 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 ADAMTS5Q9UNA0 930 aa19.17■□□□□ 0.66
HMGCL-209ENST00000513148 PLA2G6O60733 806 aa19.16■□□□□ 0.66
HMGCL-209ENST00000513148 ZBED4O75132 1171 aa19.16■□□□□ 0.66
HMGCL-209ENST00000513148 RBM25P49756 843 aaKnown RBP19.16■□□□□ 0.66
HMGCL-209ENST00000513148 KIF22Q14807 665 aa19.16■□□□□ 0.66
HMGCL-209ENST00000513148 WDR78Q5VTH9 848 aa19.16■□□□□ 0.66
HMGCL-209ENST00000513148 CCDC174Q6PII3 467 aa19.16■□□□□ 0.66
HMGCL-209ENST00000513148 CTCFLQ8NI51 663 aaPredicted RBP19.16■□□□□ 0.66
HMGCL-209ENST00000513148 KLRF2D3W0D1 207 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 CTGFP29279 349 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 TOB2Q14106 344 aaPredicted RBP19.15■□□□□ 0.66
HMGCL-209ENST00000513148 BTNL9Q6UXG8 535 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 CCAR1Q8IX12 1150 aaKnown RBP19.15■□□□□ 0.66
HMGCL-209ENST00000513148 IL17RAQ96F46 866 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 ERO1AQ96HE7 468 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 SPATC1LQ9H0A9 340 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 PORCNQ9H237 461 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 SLC38A10Q9HBR0 1119 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 RAVER2Q9HCJ3 691 aaKnown RBP19.15■□□□□ 0.66
HMGCL-209ENST00000513148 PALM3A6NDB9 673 aaPredicted RBP19.15■□□□□ 0.66
HMGCL-209ENST00000513148 GOLGA8BA8MQT2 603 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 ZBTB43O43298 467 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 PSMC4P43686 418 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 NEK4P51957 841 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 REPS2Q8NFH8 660 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 EFCC1Q9HA90 598 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms