RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CETPP11597 493 aa14.55□□□□□ -0.08
PDPN-210ENST00000513143 FAM160B2Q86V87 743 aa14.55□□□□□ -0.08
PDPN-210ENST00000513143 CHURC1Q8WUH1 139 aa14.55□□□□□ -0.08
PDPN-210ENST00000513143 CCDC102AQ96A19 550 aa14.55□□□□□ -0.08
PDPN-210ENST00000513143 UBA5Q9GZZ9 404 aa14.55□□□□□ -0.08
PDPN-210ENST00000513143 CPVLQ9H3G5 476 aa14.55□□□□□ -0.08
PDPN-210ENST00000513143 RPAP3Q9H6T3 665 aaPredicted RBP14.55□□□□□ -0.08
PDPN-210ENST00000513143 CNTNAP5Q8WYK1 1306 aa14.55□□□□□ -0.08
PDPN-210ENST00000513143 PTPDC1A2A3K4 754 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 FAM155AB1AL88 458 aaPredicted RBP14.54□□□□□ -0.08
PDPN-210ENST00000513143 USP17L15C9J2P7 530 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 USP17L13C9JLJ4 530 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 USP17L11C9JVI0 530 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 USP17L18D6R9N7 530 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 USP17L22D6RA61 530 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 USP17L17D6RBQ6 530 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 USP17L19D6RCP7 530 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 USP17L20D6RJB6 530 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 JAK2O60674 1132 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 FMNL1O95466 1100 aaPredicted RBP14.54□□□□□ -0.08
PDPN-210ENST00000513143 HSP90AA1P07900 732 aaKnown RBP14.54□□□□□ -0.08
PDPN-210ENST00000513143 HOXA7P31268 230 aaPredicted RBP14.54□□□□□ -0.08
PDPN-210ENST00000513143 SLC16A2P36021 539 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 STAT2P52630 851 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 SSRP1Q08945 709 aaKnown RBP14.54□□□□□ -0.08
PDPN-210ENST00000513143 USP17L24Q0WX57 530 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 MKRN3Q13064 507 aaKnown RBP14.54□□□□□ -0.08
PDPN-210ENST00000513143 GADL1Q6ZQY3 521 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 CATSPERGQ6ZRH7 1159 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 ADGRF4Q8IZF3 695 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 CCDC82Q8N4S0 544 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 PHKBQ93100 1093 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 RNF26Q9BY78 433 aaPredicted RBP14.54□□□□□ -0.08
PDPN-210ENST00000513143 ISY1Q9ULR0 285 aaKnown RBP14.54□□□□□ -0.08
PDPN-210ENST00000513143 AGTPBP1Q9UPW5 1226 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 STK36Q9NRP7 1315 aa14.54□□□□□ -0.08
PDPN-210ENST00000513143 TESPA1A2RU30 521 aaPredicted RBP14.53□□□□□ -0.08
PDPN-210ENST00000513143 RASSF10A6NK89 507 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 PRPF3O43395 683 aaKnown RBP14.53□□□□□ -0.08
PDPN-210ENST00000513143 DTNBO60941 627 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 HMGN5P82970 282 aaKnown RBP14.53□□□□□ -0.08
PDPN-210ENST00000513143 TREML2Q5T2D2 321 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 SYDE2Q5VT97 1194 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 GPAT2Q6NUI2 795 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 TRIM22Q8IYM9 498 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 BRI3BPQ8WY22 251 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 MTMR8Q96EF0 704 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 SLF1Q9BQI6 1058 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 SLC26A6Q9BXS9 759 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 TANGO6Q9C0B7 1094 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 JMJD4Q9H9V9 463 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 FBXO28Q9NVF7 368 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 DAXXQ9UER7 740 aaPredicted RBP14.53□□□□□ -0.08
PDPN-210ENST00000513143 PRR12Q9ULL5 1215 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 SMC3Q9UQE7 1217 aa14.53□□□□□ -0.08
PDPN-210ENST00000513143 V9GY48 417 aaPredicted RBP14.53□□□□□ -0.08
PDPN-210ENST00000513143 CCL15-CCL14A0A0B4J2E2 113 aa14.52□□□□□ -0.08
PDPN-210ENST00000513143 PPFIA3O75145 1194 aa14.52□□□□□ -0.08
PDPN-210ENST00000513143 FLOT1O75955 427 aa14.52□□□□□ -0.08
PDPN-210ENST00000513143 FDPSP14324 419 aaKnown RBP14.52□□□□□ -0.08
PDPN-210ENST00000513143 IKQ13123 557 aaPredicted RBP14.52□□□□□ -0.08
PDPN-210ENST00000513143 COG2Q14746 738 aa14.52□□□□□ -0.08
PDPN-210ENST00000513143 CCL15Q16663 113 aa14.52□□□□□ -0.08
PDPN-210ENST00000513143 DEFB115Q30KQ5 88 aa14.52□□□□□ -0.08
PDPN-210ENST00000513143 PRPF38AQ8NAV1 312 aaKnown RBP14.52□□□□□ -0.08
PDPN-210ENST00000513143 SPRYD3Q8NCJ5 442 aa14.52□□□□□ -0.08
PDPN-210ENST00000513143 DDX11Q96FC9 970 aa14.52□□□□□ -0.08
PDPN-210ENST00000513143 VAT1LQ9HCJ6 419 aa14.52□□□□□ -0.08
PDPN-210ENST00000513143 RBM27Q9P2N5 1060 aaKnown RBP14.52□□□□□ -0.08
PDPN-210ENST00000513143 ORC3Q9UBD5 711 aaPredicted RBP14.52□□□□□ -0.08
PDPN-210ENST00000513143 PPP1R9AQ9ULJ8 1098 aa14.52□□□□□ -0.08
PDPN-210ENST00000513143 MANSC4A6NHS7 340 aaPredicted RBP14.51□□□□□ -0.09
PDPN-210ENST00000513143 BTBD19C9JJ37 291 aa14.51□□□□□ -0.09
PDPN-210ENST00000513143 HAX1O00165 279 aa14.51□□□□□ -0.09
PDPN-210ENST00000513143 DEXIO95424 95 aa14.51□□□□□ -0.09
PDPN-210ENST00000513143 GJB2P29033 226 aa14.51□□□□□ -0.09
PDPN-210ENST00000513143 AKAP17AQ02040 695 aaKnown RBP14.51□□□□□ -0.09
PDPN-210ENST00000513143 PABPC4Q13310 644 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDPN-210ENST00000513143 PKN1Q16512 942 aa14.51□□□□□ -0.09
PDPN-210ENST00000513143 KIFC2Q96AC6 838 aa14.51□□□□□ -0.09
PDPN-210ENST00000513143 RRP36Q96EU6 259 aaKnown RBP14.51□□□□□ -0.09
PDPN-210ENST00000513143 CWC22Q9HCG8 908 aaKnown RBP14.51□□□□□ -0.09
PDPN-210ENST00000513143 HOXC10Q9NYD6 342 aa14.51□□□□□ -0.09
PDPN-210ENST00000513143 ADAMTS5Q9UNA0 930 aa14.51□□□□□ -0.09
PDPN-210ENST00000513143 SLC45A1Q9Y2W3 748 aa14.51□□□□□ -0.09
PDPN-210ENST00000513143 MYPNQ86TC9 1320 aa14.51□□□□□ -0.09
PDPN-210ENST00000513143 COL11A1P12107 1806 aaPredicted RBP14.51□□□□□ -0.09
PDPN-210ENST00000513143 PNMA6FA0A0J9YX94 578 aa14.5□□□□□ -0.09
PDPN-210ENST00000513143 FDX1P10109 184 aa14.5□□□□□ -0.09
PDPN-210ENST00000513143 INHBEP58166 350 aa14.5□□□□□ -0.09
PDPN-210ENST00000513143 PFKFB3Q16875 520 aaPredicted RBP14.5□□□□□ -0.09
PDPN-210ENST00000513143 CYP4F22Q6NT55 531 aa14.5□□□□□ -0.09
PDPN-210ENST00000513143 ANKRD23Q86SG2 305 aa14.5□□□□□ -0.09
PDPN-210ENST00000513143 PIGSQ96S52 555 aa14.5□□□□□ -0.09
PDPN-210ENST00000513143 RANBP17Q9H2T7 1088 aaKnown RBP14.5□□□□□ -0.09
PDPN-210ENST00000513143 SMCHD1A6NHR9 2005 aa14.5□□□□□ -0.09
PDPN-210ENST00000513143 hCG_1642624A0A1W2PR95 340 aa14.49□□□□□ -0.09
PDPN-210ENST00000513143 ZBTB5O15062 677 aa14.49□□□□□ -0.09
PDPN-210ENST00000513143 SCG2P13521 617 aa14.49□□□□□ -0.09
PDPN-210ENST00000513143 OSBPP22059 807 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms