RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 EDC3Q96F86 508 aaKnown RBP15.15■□□□□ 0.02
SDHA-215ENST00000512962 SPSB2Q99619 263 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 BTBD7Q9P203 1132 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 HERC5Q9UII4 1024 aaKnown RBP15.15■□□□□ 0.02
SDHA-215ENST00000512962 ZBTB21Q9ULJ3 1066 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 REV3LO60673 3130 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 MYH1P12882 1939 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 PLXNA1Q9UIW2 1896 aa15.14■□□□□ 0.01
SDHA-215ENST00000512962 A0A1B0GUL7 405 aa15.14■□□□□ 0.01
SDHA-215ENST00000512962 IL15P40933 162 aaPredicted RBP15.14■□□□□ 0.01
SDHA-215ENST00000512962 ADGRA1Q86SQ6 560 aa15.14■□□□□ 0.01
SDHA-215ENST00000512962 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
SDHA-215ENST00000512962 XAGE2Q96GT9 111 aa15.14■□□□□ 0.01
SDHA-215ENST00000512962 UCN2Q96RP3 112 aa15.14■□□□□ 0.01
SDHA-215ENST00000512962 PPP1R12CQ9BZL4 782 aa15.14■□□□□ 0.01
SDHA-215ENST00000512962 PRKAG2Q9UGJ0 569 aa15.14■□□□□ 0.01
SDHA-215ENST00000512962 GBF1Q92538 1859 aa15.14■□□□□ 0.01
SDHA-215ENST00000512962 PTPRCP08575 1304 aa15.14■□□□□ 0.01
SDHA-215ENST00000512962 USP17L10C9JJH3 530 aa15.13■□□□□ 0.01
SDHA-215ENST00000512962 DXOO77932 396 aaKnown RBP15.13■□□□□ 0.01
SDHA-215ENST00000512962 NR1H3Q13133 447 aa15.13■□□□□ 0.01
SDHA-215ENST00000512962 ZYXQ15942 572 aaKnown RBP15.13■□□□□ 0.01
SDHA-215ENST00000512962 PRDM9Q9NQV7 894 aa15.13■□□□□ 0.01
SDHA-215ENST00000512962 CHD9Q3L8U1 2897 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 ASNSP08243 561 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 HOXC6P09630 235 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 FBXO45P0C2W1 286 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 PLA2G5P39877 138 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 TFCP2Q12800 502 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 SEMA3FQ13275 785 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 GRB14Q14449 540 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 WDR78Q5VTH9 848 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 MFSD14CQ5VZR4 134 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 SPTY2D1Q68D10 685 aaPredicted RBP15.12■□□□□ 0.01
SDHA-215ENST00000512962 METTL16Q86W50 562 aaKnown RBP15.12■□□□□ 0.01
SDHA-215ENST00000512962 MAPKAPK5Q8IW41 473 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 FERMT2Q96AC1 680 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 COPRSQ9NQ92 184 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 PARP14Q460N5 1801 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 SMCHD1A6NHR9 2005 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 FLT1P17948 1338 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 ZNF521Q96K83 1311 aa15.12■□□□□ 0.01
SDHA-215ENST00000512962 SLC15A5A6NIM6 579 aa15.11■□□□□ 0.01
SDHA-215ENST00000512962 C19orf81C9J6K1 198 aa15.11■□□□□ 0.01
SDHA-215ENST00000512962 CCNYL3P0C7X3 344 aa15.11■□□□□ 0.01
SDHA-215ENST00000512962 RFX1P22670 979 aa15.11■□□□□ 0.01
SDHA-215ENST00000512962 CTHP32929 405 aa15.11■□□□□ 0.01
SDHA-215ENST00000512962 ADCYAP1R1P41586 468 aa15.11■□□□□ 0.01
SDHA-215ENST00000512962 CCAR1Q8IX12 1150 aaKnown RBP15.11■□□□□ 0.01
SDHA-215ENST00000512962 AATFQ9NY61 560 aaKnown RBP eCLIP15.11■□□□□ 0.01
SDHA-215ENST00000512962 PI4KBQ9UBF8 816 aa15.11■□□□□ 0.01
SDHA-215ENST00000512962 PALD1Q9ULE6 856 aa15.11■□□□□ 0.01
SDHA-215ENST00000512962 TMEM265A0A087WTH1 108 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 PALM3A6NDB9 673 aaPredicted RBP15.1■□□□□ 0.01
SDHA-215ENST00000512962 ZBBXA8MT70 800 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 TLL1O43897 1013 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 MCAMP43121 646 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 MMP16P51512 607 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 ATP2B2Q01814 1243 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 PRAMEF19Q5SWL8 479 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 SPATA5Q8NB90 893 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 TGFBRAP1Q8WUH2 860 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 PBXIP1Q96AQ6 731 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 C12orf42Q96LP6 360 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 RNPC3Q96LT9 517 aaKnown RBP15.1■□□□□ 0.01
SDHA-215ENST00000512962 TRAIPQ9BWF2 469 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 MRS2Q9HD23 443 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 RAI14Q9P0K7 980 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 SAP30BPQ9UHR5 308 aaKnown RBP15.1■□□□□ 0.01
SDHA-215ENST00000512962 RABGAP1Q9Y3P9 1069 aa15.1■□□□□ 0.01
SDHA-215ENST00000512962 TCF20Q9UGU0 1960 aaKnown RBP15.1■□□□□ 0.01
SDHA-215ENST00000512962 ZNFX1Q9P2E3 1918 aaKnown RBP15.09■□□□□ 0.01
SDHA-215ENST00000512962 COL11A1P12107 1806 aaPredicted RBP15.09■□□□□ 0.01
SDHA-215ENST00000512962 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.09■□□□□ 0.01
SDHA-215ENST00000512962 MSCO60682 206 aa15.09■□□□□ 0.01
SDHA-215ENST00000512962 GH2P01242 217 aa15.09■□□□□ 0.01
SDHA-215ENST00000512962 UBTFL1P0CB47 393 aaPredicted RBP15.09■□□□□ 0.01
SDHA-215ENST00000512962 TLE2Q04725 743 aa15.09■□□□□ 0.01
SDHA-215ENST00000512962 FAM47AQ5JRC9 791 aa15.09■□□□□ 0.01
SDHA-215ENST00000512962 USP17L2Q6R6M4 530 aa15.09■□□□□ 0.01
SDHA-215ENST00000512962 ACER1Q8TDN7 264 aa15.09■□□□□ 0.01
SDHA-215ENST00000512962 PPM1EQ8WY54 764 aa15.09■□□□□ 0.01
SDHA-215ENST00000512962 CWC22Q9HCG8 908 aaKnown RBP15.09■□□□□ 0.01
SDHA-215ENST00000512962 VCAM1P19320 739 aa15.08■□□□□ 0
SDHA-215ENST00000512962 LRRC41Q15345 812 aa15.08■□□□□ 0
SDHA-215ENST00000512962 CATSPERGQ6ZRH7 1159 aa15.08■□□□□ 0
SDHA-215ENST00000512962 NYAP1Q6ZVC0 841 aa15.08■□□□□ 0
SDHA-215ENST00000512962 GTF3C2Q8WUA4 911 aaPredicted RBP15.08■□□□□ 0
SDHA-215ENST00000512962 MEIS3Q99687 375 aa15.08■□□□□ 0
SDHA-215ENST00000512962 EVA1BQ9NVM1 165 aa15.08■□□□□ 0
SDHA-215ENST00000512962 POTEMA6NI47 508 aa15.07■□□□□ 0
SDHA-215ENST00000512962 KBTBD13C9JR72 458 aa15.07■□□□□ 0
SDHA-215ENST00000512962 COBLO75128 1261 aa15.07■□□□□ 0
SDHA-215ENST00000512962 MAP4K4O95819 1239 aaPredicted RBP15.07■□□□□ 0
SDHA-215ENST00000512962 LDHCP07864 332 aa15.07■□□□□ 0
SDHA-215ENST00000512962 ARID4AP29374 1257 aaPredicted RBP15.07■□□□□ 0
SDHA-215ENST00000512962 GSTO1P78417 241 aa15.07■□□□□ 0
SDHA-215ENST00000512962 MVPQ14764 893 aaKnown RBP15.07■□□□□ 0
SDHA-215ENST00000512962 CRACR2BQ8N4Y2 399 aaPredicted RBP15.07■□□□□ 0
SDHA-215ENST00000512962 NECAB3Q96P71 396 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms