RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 ZYXQ15942 572 aaKnown RBP13.74□□□□□ -0.21
COL11A1-210ENST00000512756 NSMFQ6X4W1 530 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 RABGGTAQ92696 567 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 KLRF2D3W0D1 207 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 H0YIN7 160 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 KRIT1O00522 736 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 KCNK3O14649 394 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 ATP8B1O43520 1251 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 ALDH1B1P30837 517 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 CA8P35219 290 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 GEN1Q17RS7 908 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 ARHGEF2Q92974 986 aaKnown RBP13.74□□□□□ -0.21
COL11A1-210ENST00000512756 CLIC4Q9Y696 253 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 ZNF521Q96K83 1311 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 ARHGEF5Q12774 1597 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 CRCPO75575 148 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 IRX3P78415 501 aaPredicted RBP13.74□□□□□ -0.21
COL11A1-210ENST00000512756 ANKRD20A3Q5VUR7 823 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 CPXCR1Q8N123 301 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 CCDC89Q8N998 374 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 TEKT1Q969V4 418 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 NLRX1Q86UT6 975 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 TBC1D31Q96DN5 1066 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 USP40Q9NVE5 1235 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 P4HA1P13674 534 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 MFSD14BQ5SR56 506 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 MIER3Q7Z3K6 550 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 PANK4Q9NVE7 773 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 H0YCG3 227 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 H2AFZP0C0S5 128 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 ZNF827Q17R98 1081 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 TTLL7Q6ZT98 887 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 H2AFVQ71UI9 128 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 FAM71BQ8TC56 605 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 RNF26Q9BY78 433 aaPredicted RBP13.73□□□□□ -0.21
COL11A1-210ENST00000512756 COL4A3BPQ9Y5P4 624 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 TNNI1P19237 187 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 STX2P32856 288 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 COPB1P53618 953 aaKnown RBP13.73□□□□□ -0.21
COL11A1-210ENST00000512756 PTGDRQ13258 359 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 LRRC24Q50LG9 513 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 CLIC6Q96NY7 704 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 PCDHA5Q9Y5H7 936 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 SYNMO15061 1565 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 PDE8BO95263 885 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 ADCK5Q3MIX3 580 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 CCDC125Q86Z20 511 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 CMTR1Q8N1G2 835 aaKnown RBP13.73□□□□□ -0.21
COL11A1-210ENST00000512756 SYMPKQ92797 1274 aaKnown RBP13.73□□□□□ -0.21
COL11A1-210ENST00000512756 RABEP2Q9H5N1 569 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 CDC23Q9UJX2 597 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 PNMA2Q9UL42 364 aa13.73□□□□□ -0.21
COL11A1-210ENST00000512756 GNGT1P63211 74 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
COL11A1-210ENST00000512756 FAM26FQ5R3K3 315 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 SRGAP1Q7Z6B7 1085 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 LARGE2Q8N3Y3 721 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 ATP2A3Q93084 1043 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 VPS37BQ9H9H4 285 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 TBC1D8O95759 1140 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 SDR42E1Q8WUS8 393 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
COL11A1-210ENST00000512756 RIC8AQ9NPQ8 531 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 DBNLQ9UJU6 430 aaKnown RBP13.72□□□□□ -0.21
COL11A1-210ENST00000512756 SAMD9Q5K651 1589 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 GIPC1O14908 333 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 TROVE2P10155 538 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL11A1-210ENST00000512756 ATP2B4P23634 1241 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 TCP10Q12799 353 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 TSC1Q92574 1164 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 BZW2Q9Y6E2 419 aaKnown RBP13.72□□□□□ -0.21
COL11A1-210ENST00000512756 GUCY2FP51841 1108 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 CLNS1AP54105 237 aaKnown RBP13.72□□□□□ -0.21
COL11A1-210ENST00000512756 PHLDB2Q86SQ0 1253 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 GPIHBP1Q8IV16 184 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 STK32BQ9NY57 414 aa13.72□□□□□ -0.21
COL11A1-210ENST00000512756 EEF1GP26641 437 aaKnown RBP13.71□□□□□ -0.21
COL11A1-210ENST00000512756 BCAMP50895 628 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 RETREG2Q8NC44 543 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 GDAP1L1Q96MZ0 367 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 VCXQ9H320 206 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 LARSQ9P2J5 1176 aaKnown RBP13.71□□□□□ -0.21
COL11A1-210ENST00000512756 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 MRPL11Q9Y3B7 192 aaKnown RBP13.71□□□□□ -0.21
COL11A1-210ENST00000512756 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 CARMIL3Q8ND23 1372 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 MAP3K15Q6ZN16 1313 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 SEMA3EO15041 775 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 GYG1P46976 350 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 CYP2J2P51589 502 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 HSPA2P54652 639 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 DLGAP5Q15398 846 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 NSUN7Q8NE18 718 aaKnown RBP13.71□□□□□ -0.21
COL11A1-210ENST00000512756 PPANQ9NQ55 473 aaKnown RBP13.71□□□□□ -0.21
COL11A1-210ENST00000512756 TYW1Q9NV66 732 aaKnown RBP13.71□□□□□ -0.21
COL11A1-210ENST00000512756 BCAP29Q9UHQ4 241 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 RCOR1Q9UKL0 485 aa13.71□□□□□ -0.21
COL11A1-210ENST00000512756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms