RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 CRBNQ96SW2 442 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 XPO4Q9C0E2 1151 aaKnown RBP7.4□□□□□ -1.23
CHD1-208ENST00000512392 PRKRIP1Q9H875 184 aaPredicted RBP7.4□□□□□ -1.23
CHD1-208ENST00000512392 LRRC4BQ9NT99 713 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 RRN3Q9NYV6 651 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 ZNF652Q9Y2D9 606 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 AFG3L2Q9Y4W6 797 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 GTPBP10A4D1E9 387 aaKnown RBP7.39□□□□□ -1.23
CHD1-208ENST00000512392 FBXO21O94952 628 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 CCT5P48643 541 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 GPR158Q5T848 1215 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 RUFY4Q6ZNE9 571 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 BTLAQ7Z6A9 289 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 UBE2Q1Q7Z7E8 422 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 GALNT12Q8IXK2 581 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 FAM178BQ8IXR5 827 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 CEP120Q8N960 986 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 DDX1Q92499 740 aaKnown RBP7.39□□□□□ -1.23
CHD1-208ENST00000512392 SNX21Q969T3 373 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 KIAA1586Q9HCI6 787 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 ZCCHC17Q9NP64 241 aaKnown RBP7.39□□□□□ -1.23
CHD1-208ENST00000512392 SMTNL1A8MU46 457 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 FAM155AB1AL88 458 aaPredicted RBP7.39□□□□□ -1.23
CHD1-208ENST00000512392 GPR25O00155 361 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 CD4P01730 458 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 LPOP22079 712 aaPredicted RBP7.39□□□□□ -1.23
CHD1-208ENST00000512392 GRM2Q14416 872 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 SEPT7Q16181 437 aaKnown RBP7.39□□□□□ -1.23
CHD1-208ENST00000512392 GJC2Q5T442 439 aaPredicted RBP7.39□□□□□ -1.23
CHD1-208ENST00000512392 SPOCD1Q6ZMY3 1216 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 CBARPQ8N350 705 aaPredicted RBP7.39□□□□□ -1.23
CHD1-208ENST00000512392 TBC1D31Q96DN5 1066 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 FERD3LQ96RJ6 166 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 CRB3Q9BUF7 120 aa7.39□□□□□ -1.23
CHD1-208ENST00000512392 EFSO43281 561 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 TMCC2O75069 709 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 ASGR2P07307 311 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 MAPTP10636 758 aaKnown RBP7.38□□□□□ -1.23
CHD1-208ENST00000512392 MCM4P33991 863 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 CHKAP35790 457 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 ZNF131P52739 623 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 USP14P54578 494 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 AK2P54819 239 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 SLC10A5Q5PT55 438 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 SNAP47Q5SQN1 464 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 ERICH6BQ5W0A0 696 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 ZNF449Q6P9G9 518 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 SPATS2Q86XZ4 545 aaKnown RBP7.38□□□□□ -1.23
CHD1-208ENST00000512392 KISS1RQ969F8 398 aaPredicted RBP7.38□□□□□ -1.23
CHD1-208ENST00000512392 ABHD17AQ96GS6 310 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.38□□□□□ -1.23
CHD1-208ENST00000512392 RCAN3Q9UKA8 241 aa7.38□□□□□ -1.23
CHD1-208ENST00000512392 A0A1B0GVC2 190 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 PHF20L1A8MW92 1017 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 KHNYNO15037 678 aaKnown RBP7.37□□□□□ -1.23
CHD1-208ENST00000512392 RAD52P43351 418 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 NRLP54845 237 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 SNX16P57768 344 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 TYRO3Q06418 890 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
CHD1-208ENST00000512392 TTLL5Q6EMB2 1281 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 FAM196AQ6ZSG2 479 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 LSRQ86X29 649 aaPredicted RBP7.37□□□□□ -1.23
CHD1-208ENST00000512392 NAXEQ8NCW5 288 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 NSUN6Q8TEA1 469 aaKnown RBP7.37□□□□□ -1.23
CHD1-208ENST00000512392 CCT6BQ92526 530 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 PPM1MQ96MI6 270 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 SLC26A8Q96RN1 970 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 MYD88Q99836 296 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 COL25A1Q9BXS0 654 aaPredicted RBP7.37□□□□□ -1.23
CHD1-208ENST00000512392 RSAD1Q9HA92 442 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 SNX5Q9Y5X3 404 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 SYNDIG1LA6NDD5 238 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 EYA2O00167 538 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 NEMP1O14524 444 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 TIPRLO75663 272 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 BPIFB3P59826 476 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 MPP1Q00013 466 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 GAS6Q14393 721 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 FAM209AQ5JX71 171 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 LCE2CQ5TA81 110 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 TREML1Q86YW5 311 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 ARL10Q8N8L6 244 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 TTC17Q96AE7 1141 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 ZMAT2Q96NC0 199 aaKnown RBP7.37□□□□□ -1.23
CHD1-208ENST00000512392 MTFR1LQ9H019 292 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 TCF7L1Q9HCS4 588 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 SPEF1Q9Y4P9 236 aa7.37□□□□□ -1.23
CHD1-208ENST00000512392 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 PLD2O14939 933 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 GYS1P13807 737 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 FGFR3P22607 806 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 PSMA3P25788 255 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 GSTT1P30711 240 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 INPP5BP32019 993 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 IDH3AP50213 366 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 KCNQ4P56696 695 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 PSMC1P62191 440 aaKnown RBP7.36□□□□□ -1.23
CHD1-208ENST00000512392 LMNB2Q03252 620 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 VPS53Q5VIR6 699 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms