RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MAP4K1Q92918 833 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 TRIM34Q9BYJ4 488 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 IL25Q9H293 177 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 ZBTB21Q9ULJ3 1066 aa12.43□□□□□ -0.42
PDLIM5-217ENST00000512274 RFXAPO00287 272 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 RNF113AO15541 343 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 LDHCP07864 332 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 MCAMP43121 646 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 RABGGTBP53611 331 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 UBE3CQ15386 1083 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 MFSD5Q6N075 450 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 CWC27Q6UX04 472 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 RNF180Q86T96 592 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 SH3RF3Q8TEJ3 882 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 FEZ1Q99689 392 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 PPP1R12CQ9BZL4 782 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 TM6SF1Q9BZW5 370 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 ANO2Q9NQ90 1003 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 HMG20BQ9P0W2 317 aa12.42□□□□□ -0.42
PDLIM5-217ENST00000512274 SPDYE16A6NNV3 312 aaPredicted RBP12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 TLL1O43897 1013 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 MAP4K4O95819 1239 aaPredicted RBP12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 RARBP10826 455 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 MYOGP15173 224 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 MCM2P49736 904 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 NECTIN1Q15223 517 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 MCMDC2Q4G0Z9 681 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 RASIP1Q5U651 963 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 CCDC174Q6PII3 467 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 MAPKAPK5Q8IW41 473 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 LENG1Q96BZ8 264 aaPredicted RBP12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 UIMC1Q96RL1 719 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 DSCC1Q9BVC3 393 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 MOV10L1Q9BXT6 1211 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 STARD7Q9NQZ5 370 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 ZNF236Q9UL36 1845 aa12.41□□□□□ -0.42
PDLIM5-217ENST00000512274 MYO5AQ9Y4I1 1855 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 A0A0D9SFI3 127 aa12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 GOLIM4O00461 696 aa12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 GH2P01242 217 aa12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 GSTO1P78417 241 aa12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 ANKRD33Q7Z3H0 272 aa12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 TMEM199Q8N511 208 aa12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 SPATA5Q8NB90 893 aa12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 TGFBRAP1Q8WUH2 860 aa12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 NSUN4Q96CB9 384 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 DNAJC2Q99543 621 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 DHX36Q9H2U1 1008 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 RAI14Q9P0K7 980 aa12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 SAP30BPQ9UHR5 308 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 PALD1Q9ULE6 856 aa12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 MYH7P12883 1935 aa12.4□□□□□ -0.42
PDLIM5-217ENST00000512274 ZMYM6O95789 1325 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 NCOR1O75376 2440 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 STRNO43815 780 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 CYP2E1P05181 493 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 TAL1P17542 331 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 VCAM1P19320 739 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 ERCC3P19447 782 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 PPP2R2DQ66LE6 453 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 KRT40Q6A162 431 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 FOXP4Q8IVH2 680 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 HERVK_113Q902F9 699 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 APPBP2Q92624 585 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 MAML3Q96JK9 1138 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 C12orf42Q96LP6 360 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 FAM227BQ96M60 508 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 TOX2Q96NM4 488 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 CERS4Q9HA82 394 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 CD320Q9NPF0 282 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 AATFQ9NY61 560 aaKnown RBP eCLIP12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 TBX21Q9UL17 535 aa12.39□□□□□ -0.43
PDLIM5-217ENST00000512274 PI4K2BG5E9Z4 385 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 ST18O60284 1047 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 ADD2P35612 726 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 ZAP70P43403 619 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 ACLYP53396 1101 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 NHLH1Q02575 133 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 PLS1Q14651 629 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 RAB3GAP1Q15042 981 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 RNF20Q5VTR2 975 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 PSRC1Q6PGN9 363 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 LBX2Q6XYB7 198 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 OTOP2Q7RTS6 562 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 NCAPG2Q86XI2 1143 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 HSCBQ8IWL3 235 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 ACER1Q8TDN7 264 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 NUP133Q8WUM0 1156 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 VTI1AQ96AJ9 217 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 NOL10Q9BSC4 688 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 ALDH8A1Q9H2A2 487 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 SLC5A4Q9NY91 659 aa12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-217ENST00000512274 GTPBP6O43824 516 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 FGBP02675 491 aa12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 CYP2C18P33260 490 aa12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 USP14P54578 494 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms