RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 PMS1P54277 932 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 ERVK-24P63145 666 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 TPM4P67936 248 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 SCRN1Q12765 414 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 CLEC16AQ2KHT3 1053 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 COL13A1Q5TAT6 717 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 KDM4DQ6B0I6 523 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 PDXDC2PQ6P474 469 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 LARGE2Q8N3Y3 721 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 DDX17Q92841 729 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZNF317Q96PQ6 595 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 EHD4Q9H223 541 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 TNRC6AQ8NDV7 1962 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 STBD1O95210 358 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 CCNG1P51959 295 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 GALNTL6Q49A17 601 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 SWT1Q5T5J6 900 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 RHBDF2Q6PJF5 856 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 RAD9BQ6WBX8 426 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 TICAM1Q8IUC6 712 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 C1orf131Q8NDD1 294 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 HNRNPLLQ8WVV9 542 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZNF333Q96JL9 665 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 ADAM33Q9BZ11 813 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 SUGCTQ9HAC7 445 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 DNAH10Q8IVF4 4471 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 DOPEY2Q9Y3R5 2298 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 INHBBP09529 407 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 LMNB1P20700 586 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 GRIK5Q16478 980 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 DCAF12L1Q5VU92 463 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 TMEM151AQ8N4L1 468 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 ACBD4Q8NC06 268 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 CCDC112Q8NEF3 446 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 BAP1Q92560 729 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 FAM227BQ96M60 508 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 EPC1Q9H2F5 836 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 SLC52A2Q9HAB3 445 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 C11orf16Q9NQ32 467 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 HECAQ9UBI9 543 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 PKD1L1Q8TDX9 2849 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 TRPM6Q9BX84 2022 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 MPDZO75970 2070 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 TRIM64CA6NLI5 447 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 PTMAP06454 111 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 YBX1P67809 324 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 JAG1P78504 1218 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 TRADDQ15628 312 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 PRR5LQ6MZQ0 368 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 TTLL7Q6ZT98 887 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 AGBL3Q8NEM8 1001 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 TANKQ92844 425 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 TP53INP1Q96A56 240 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 SNX27Q96L92 541 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 NAA15Q9BXJ9 866 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 C1orf115Q9H7X2 142 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 SIX2Q9NPC8 291 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 FRMPD2Q68DX3 1309 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 HECTD4Q9Y4D8 3996 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 CEP250Q9BV73 2442 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 PTPN13Q12923 2485 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 K7ELQ4 463 aaPredicted RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 INPPL1O15357 1258 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 AK2P54819 239 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 TMF1P82094 1093 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 NEXNQ0ZGT2 675 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 MPP2Q14168 576 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 RPAINQ86UA6 219 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 OCEL1Q9H607 264 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 A1CFQ9NQ94 594 aaKnown RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 ASTN1O14525 1302 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 NFASCO94856 1347 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 LRRIQ3A6PVS8 624 aaPredicted RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 FAM177BA6PVY3 158 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 HSP90B1P14625 803 aaKnown RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 PRKAR2BP31323 418 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 RGS3P49796 1198 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 DGKZQ13574 1117 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 WDR43Q15061 677 aaKnown RBP eCLIP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 COLEC12Q5KU26 742 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 DCAF8Q5TAQ9 597 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 GIGYF2Q6Y7W6 1299 aaKnown RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 MICALL1Q8N3F8 863 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 MAGEB6Q8N7X4 407 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 LRRC57Q8N9N7 239 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 SMC1BQ8NDV3 1235 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 CHFRQ96EP1 664 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 UPF3AQ9H1J1 476 aaKnown RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 SLC52A3Q9NQ40 469 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 NFE2L3Q9Y4A8 694 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 PIKFYVEQ9Y2I7 2098 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 TET1Q8NFU7 2136 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 G3V3G9 751 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 PAEPP09466 180 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 PTMSP20962 102 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 GUCY1A2P33402 732 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 TROAPQ12815 778 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 NR1I3Q14994 352 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZRSR2Q15696 482 aaKnown RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 USP41Q3LFD5 358 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms