RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 GIGYF1O75420 1035 aaPredicted RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 FLOT1O75955 427 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 KRT15P19012 456 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 RNASE9P60153 205 aaKnown RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 SLC9C1Q4G0N8 1177 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 JADE1Q6IE81 842 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 MYLK4Q86YV6 388 aaPredicted RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 RDH13Q8NBN7 331 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 MAIP1Q8WWC4 291 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 INTS4Q96HW7 963 aaKnown RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 PARP2Q9UGN5 583 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 TPCN1Q9ULQ1 816 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 RABGAP1Q9Y3P9 1069 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 M0R2C6 588 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 STMN1P16949 149 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 INPP1P49441 399 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 KLHL40Q2TBA0 621 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 SUPT20HL1Q3ZLR7 823 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 XKR9Q5GH70 373 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 FASTKD5Q7L8L6 764 aaKnown RBP6.36□□□□□ -1.39
USP38-203ENST00000511739 CSGALNACT2Q8N6G5 542 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 HDAC11Q96DB2 347 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 RILPQ96NA2 401 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 CPSF1Q10570 1443 aaKnown RBP6.36□□□□□ -1.39
USP38-203ENST00000511739 EBAG9O00559 213 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 LMNB1P20700 586 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 ARHGAP44Q17R89 818 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 NXNQ6DKJ4 435 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 DYMQ7RTS9 669 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 EXOC8Q8IYI6 725 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 ARHGAP24Q8N264 748 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 RETREG2Q8NC44 543 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 PGBD1Q96JS3 809 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 TMEM87BQ96K49 555 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 TRIM31Q9BZY9 425 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 VCX3AQ9NNX9 186 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 PNPLA6Q8IY17 1366 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 ARHGEF37A1IGU5 675 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 CLGNO14967 610 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 STAM2O75886 525 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 FMNL1O95466 1100 aaPredicted RBP6.36□□□□□ -1.39
USP38-203ENST00000511739 RHOXF2BP0C7M4 288 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 ZNF853P0CG23 659 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 TFDP1Q14186 410 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 PRPSAP1Q14558 356 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 NELFCDQ8IXH7 590 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 GDAP1Q8TB36 358 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 ARHGEF2Q92974 986 aaKnown RBP6.36□□□□□ -1.39
USP38-203ENST00000511739 RHOXF2Q9BQY4 288 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 FTOQ9C0B1 505 aaKnown RBP eCLIP6.36□□□□□ -1.39
USP38-203ENST00000511739 OLA1Q9NTK5 396 aaKnown RBP6.36□□□□□ -1.39
USP38-203ENST00000511739 BCAP29Q9UHQ4 241 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 AKT3Q9Y243 479 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 NFKBIAP25963 317 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 POLGP54098 1239 aaPredicted RBP6.36□□□□□ -1.39
USP38-203ENST00000511739 NOP14P78316 857 aaKnown RBP6.36□□□□□ -1.39
USP38-203ENST00000511739 ATP11AP98196 1134 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 IQCB1Q15051 598 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 MFSD14BQ5SR56 506 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 CCDC105Q8IYK2 499 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 PRPF38AQ8NAV1 312 aaKnown RBP6.36□□□□□ -1.39
USP38-203ENST00000511739 ATP6V1E2Q96A05 226 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 VPS37BQ9H9H4 285 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 PLCB1Q9NQ66 1216 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 PRDM10Q9NQV6 1147 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 A0A1B0GUL7 405 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 F8W8V4 182 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 DPYSL4O14531 572 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 LRMPQ12912 555 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 RBM46Q8TBY0 533 aaKnown RBP6.36□□□□□ -1.39
USP38-203ENST00000511739 RBSNQ9H1K0 784 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 VPS16Q9H269 839 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 HELLSQ9NRZ9 838 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 NEXMIFQ5QGS0 1516 aa6.36□□□□□ -1.39
USP38-203ENST00000511739 LRRIQ4A6NIV6 560 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 PPFIA2O75334 1257 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 TAF5LO75529 589 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 TBC1D8O95759 1140 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 TUBB4AP04350 444 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 POLR2MP0CAP2 368 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 SAT1P21673 171 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 RXRBP28702 533 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 CCDC186Q7Z3E2 898 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.35□□□□□ -1.39
USP38-203ENST00000511739 CSRNP1Q96S65 589 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 SLC7A5P2Q9GIP4 190 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 MAPK8IP1Q9UQF2 711 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 IGSF1Q8N6C5 1336 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 BNIP3LO60238 219 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 PRR16Q569H4 304 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 KIAA0825Q8IV33 1275 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 ACRBPQ8NEB7 543 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 RAB20Q9NX57 234 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 USH1CQ9Y6N9 552 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 AKR1B15C9JRZ8 316 aaPredicted RBP6.35□□□□□ -1.39
USP38-203ENST00000511739 EYA2O00167 538 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 TXNDC9O14530 226 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 IFNB1P01574 187 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 HPDP32754 393 aaPredicted RBP6.35□□□□□ -1.39
USP38-203ENST00000511739 ARHGAP4P98171 946 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms