RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 SIPA1L1O43166 1804 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 DDTLA6NHG4 134 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-228ENST00000511676 H3BQV1 296 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 hCG_1984214I3L0E3 225 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 PRPF3O43395 683 aaKnown RBP10.54□□□□□ -0.72
NR1I3-228ENST00000511676 BAG4O95429 457 aaKnown RBP10.54□□□□□ -0.72
NR1I3-228ENST00000511676 SNHG28P0DPA3 235 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 FDPSP14324 419 aaKnown RBP10.54□□□□□ -0.72
NR1I3-228ENST00000511676 XBP1P17861 261 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 ADD1P35611 737 aaKnown RBP10.54□□□□□ -0.72
NR1I3-228ENST00000511676 EVX2Q03828 476 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 FUT2Q10981 343 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 PKP1Q13835 747 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 GRM4Q14833 912 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 SKOR2Q2VWA4 1001 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-228ENST00000511676 CERKLQ49MI3 558 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-228ENST00000511676 ASPRV1Q53RT3 343 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 TMTC3Q6ZXV5 915 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 BRAPQ7Z569 592 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 TEX2Q8IWB9 1127 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 ZNF713Q8N859 430 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-228ENST00000511676 TMEM87AQ8NBN3 555 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 SLC44A5Q8NCS7 719 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 SLAIN1Q8ND83 568 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 FBXO18Q8NFZ0 1043 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 DPF3Q92784 378 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 MKL1Q969V6 931 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 CEP95Q96GE4 821 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 TEPSINQ96N21 525 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 TMEM47Q9BQJ4 181 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 ANP32EQ9BTT0 268 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 SPZ1Q9BXG8 430 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 TMEM39BQ9GZU3 492 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 DNAJC18Q9H819 358 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 SENP2Q9HC62 589 aa10.54□□□□□ -0.72
NR1I3-228ENST00000511676 A0A1W2PPC1 479 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 VPS37CA5D8V6 355 aaPredicted RBP10.53□□□□□ -0.72
NR1I3-228ENST00000511676 GRK4P32298 578 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 AKAP17AQ02040 695 aaKnown RBP10.53□□□□□ -0.72
NR1I3-228ENST00000511676 TCP10Q12799 353 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 TRIM29Q14134 588 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 GPATCH4Q5T3I0 446 aaKnown RBP10.53□□□□□ -0.72
NR1I3-228ENST00000511676 STK11IPQ8N1F8 1099 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 BRI3BPQ8WY22 251 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 COA7Q96BR5 231 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 C8orf76Q96K31 380 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 PTPN18Q99952 460 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.53□□□□□ -0.72
NR1I3-228ENST00000511676 SH3GLB2Q9NR46 395 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 SRRDQ9UH36 339 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 STX8Q9UNK0 236 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 PCDHAC2Q9Y5I4 1007 aa10.53□□□□□ -0.72
NR1I3-228ENST00000511676 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
NR1I3-228ENST00000511676 IRF6O14896 467 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 AKR1B1P15121 316 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 PSMC4P43686 418 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 CACNB3P54284 484 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 NOL9Q5SY16 702 aaKnown RBP10.52□□□□□ -0.73
NR1I3-228ENST00000511676 ZFPM1Q8IX07 1006 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 GMCL1P1Q8NEA9 526 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 NUP133Q8WUM0 1156 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 ALG1Q9BT22 464 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 SH2D4AQ9H788 454 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.52□□□□□ -0.73
NR1I3-228ENST00000511676 CABP5Q9NP86 173 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 KCNH4Q9UQ05 1017 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 ELP1O95163 1332 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 CNTNAP5Q8WYK1 1306 aa10.52□□□□□ -0.73
NR1I3-228ENST00000511676 MYH8P13535 1937 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 BTBD19C9JJ37 291 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 PDHXO00330 501 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 NMT2O60551 498 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 CTNND1O60716 968 aaKnown RBP10.51□□□□□ -0.73
NR1I3-228ENST00000511676 GJB1P08034 283 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 PRR29P0C7W0 189 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 EN2P19622 333 aaPredicted RBP10.51□□□□□ -0.73
NR1I3-228ENST00000511676 KRT85P78386 507 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 RESTQ13127 1097 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 ABCB5Q2M3G0 1257 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 GALNT17Q6IS24 598 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 C17orf99Q6UX52 265 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 TRMT44Q8IYL2 757 aaKnown RBP10.51□□□□□ -0.73
NR1I3-228ENST00000511676 SMCR8Q8TEV9 937 aaPredicted RBP10.51□□□□□ -0.73
NR1I3-228ENST00000511676 DCAF4Q8WV16 495 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 DDX11Q96FC9 970 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 GMCL1Q96IK5 515 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 MYL10Q9BUA6 226 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 SLC26A6Q9BXS9 759 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 SCAND2PQ9GZW5 306 aaPredicted RBP10.51□□□□□ -0.73
NR1I3-228ENST00000511676 R3HDMLQ9H3Y0 253 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 MAD2L2Q9UI95 211 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 ZNF112Q9UJU3 913 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 CFAP45Q9UL16 551 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 PTCH2Q9Y6C5 1203 aa10.51□□□□□ -0.73
NR1I3-228ENST00000511676 MORC2Q9Y6X9 1032 aaPredicted RBP10.51□□□□□ -0.73
NR1I3-228ENST00000511676 POTEFA5A3E0 1075 aa10.5□□□□□ -0.73
NR1I3-228ENST00000511676 MBD3O95983 291 aa10.5□□□□□ -0.73
NR1I3-228ENST00000511676 ASNSP08243 561 aa10.5□□□□□ -0.73
NR1I3-228ENST00000511676 PARP1P09874 1014 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms