RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 PDE4AP27815 886 aa16.03■□□□□ 0.16
CLDND1-224ENST00000511667 PDE4BQ07343 736 aa16.03■□□□□ 0.16
CLDND1-224ENST00000511667 NMIQ13287 307 aaPredicted RBP16.03■□□□□ 0.16
CLDND1-224ENST00000511667 CCL14Q16627 93 aa16.03■□□□□ 0.16
CLDND1-224ENST00000511667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLDND1-224ENST00000511667 ZNF444Q8N0Y2 327 aaPredicted RBP16.03■□□□□ 0.16
CLDND1-224ENST00000511667 MYLIPQ8WY64 445 aa16.03■□□□□ 0.16
CLDND1-224ENST00000511667 MROH8Q9H579 483 aa16.03■□□□□ 0.16
CLDND1-224ENST00000511667 FLRT1Q9NZU1 646 aa16.03■□□□□ 0.16
CLDND1-224ENST00000511667 NCOR1O75376 2440 aa16.02■□□□□ 0.16
CLDND1-224ENST00000511667 ATP2A1O14983 1001 aa16.02■□□□□ 0.16
CLDND1-224ENST00000511667 FOSL2P15408 326 aa16.02■□□□□ 0.16
CLDND1-224ENST00000511667 ERCC3P19447 782 aa16.02■□□□□ 0.16
CLDND1-224ENST00000511667 SDSP20132 328 aa16.02■□□□□ 0.16
CLDND1-224ENST00000511667 CACNB2Q08289 660 aaPredicted RBP16.02■□□□□ 0.16
CLDND1-224ENST00000511667 FAM83BQ5T0W9 1011 aa16.02■□□□□ 0.16
CLDND1-224ENST00000511667 LHX8Q68G74 356 aa16.02■□□□□ 0.16
CLDND1-224ENST00000511667 IL17RBQ9NRM6 502 aa16.02■□□□□ 0.16
CLDND1-224ENST00000511667 CCDC171Q6TFL3 1326 aa16.01■□□□□ 0.15
CLDND1-224ENST00000511667 TTLL1O95922 423 aa16.01■□□□□ 0.15
CLDND1-224ENST00000511667 SLC3A2P08195 630 aaKnown RBP16.01■□□□□ 0.15
CLDND1-224ENST00000511667 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
CLDND1-224ENST00000511667 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
CLDND1-224ENST00000511667 OLFML2BQ68BL8 750 aa16.01■□□□□ 0.15
CLDND1-224ENST00000511667 RIOX2Q8IUF8 465 aa16.01■□□□□ 0.15
CLDND1-224ENST00000511667 NPLOC4Q8TAT6 608 aa16.01■□□□□ 0.15
CLDND1-224ENST00000511667 INCENPQ9NQS7 918 aa16.01■□□□□ 0.15
CLDND1-224ENST00000511667 CLIP2Q9UDT6 1046 aa16.01■□□□□ 0.15
CLDND1-224ENST00000511667 ZNFX1Q9P2E3 1918 aaKnown RBP16.01■□□□□ 0.15
CLDND1-224ENST00000511667 COBLO75128 1261 aa16■□□□□ 0.15
CLDND1-224ENST00000511667 SLC25A27O95847 323 aa16■□□□□ 0.15
CLDND1-224ENST00000511667 ADORA2AP29274 412 aa16■□□□□ 0.15
CLDND1-224ENST00000511667 TFAP4Q01664 338 aa16■□□□□ 0.15
CLDND1-224ENST00000511667 CTDSPL2Q05D32 466 aa16■□□□□ 0.15
CLDND1-224ENST00000511667 STK11IPQ8N1F8 1099 aa16■□□□□ 0.15
CLDND1-224ENST00000511667 GMCL1Q96IK5 515 aa16■□□□□ 0.15
CLDND1-224ENST00000511667 NUP88Q99567 741 aaPredicted RBP16■□□□□ 0.15
CLDND1-224ENST00000511667 PLA2G6O60733 806 aa15.99■□□□□ 0.15
CLDND1-224ENST00000511667 TSPY3P0CV98 308 aa15.99■□□□□ 0.15
CLDND1-224ENST00000511667 TSPY8P0CW00 308 aa15.99■□□□□ 0.15
CLDND1-224ENST00000511667 COL6A1P12109 1028 aa15.99■□□□□ 0.15
CLDND1-224ENST00000511667 ATP2B2Q01814 1243 aa15.99■□□□□ 0.15
CLDND1-224ENST00000511667 LRRC26Q2I0M4 334 aa15.99■□□□□ 0.15
CLDND1-224ENST00000511667 FAM47AQ5JRC9 791 aa15.99■□□□□ 0.15
CLDND1-224ENST00000511667 CCAR1Q8IX12 1150 aaKnown RBP15.99■□□□□ 0.15
CLDND1-224ENST00000511667 PRPF38AQ8NAV1 312 aaKnown RBP15.99■□□□□ 0.15
CLDND1-224ENST00000511667 SLF1Q9BQI6 1058 aa15.99■□□□□ 0.15
CLDND1-224ENST00000511667 TCP11L1Q9NUJ3 509 aa15.99■□□□□ 0.15
CLDND1-224ENST00000511667 LAMA4Q16363 1823 aa15.98■□□□□ 0.15
CLDND1-224ENST00000511667 FRMPD3Q5JV73 1810 aa15.98■□□□□ 0.15
CLDND1-224ENST00000511667 TRIM6-TRIM34B2RNG4 842 aa15.98■□□□□ 0.15
CLDND1-224ENST00000511667 PCP11498 1178 aaKnown RBP15.98■□□□□ 0.15
CLDND1-224ENST00000511667 GSPT1P15170 499 aaKnown RBP15.98■□□□□ 0.15
CLDND1-224ENST00000511667 STAT3P40763 770 aa15.98■□□□□ 0.15
CLDND1-224ENST00000511667 PPP4R3BQ5MIZ7 849 aa15.98■□□□□ 0.15
CLDND1-224ENST00000511667 TRPV1Q8NER1 839 aa15.98■□□□□ 0.15
CLDND1-224ENST00000511667 SLC38A10Q9HBR0 1119 aa15.98■□□□□ 0.15
CLDND1-224ENST00000511667 IVNS1ABPQ9Y6Y0 642 aa15.98■□□□□ 0.15
CLDND1-224ENST00000511667 CYBAP13498 195 aa15.97■□□□□ 0.15
CLDND1-224ENST00000511667 CCND3P30281 292 aaPredicted RBP15.97■□□□□ 0.15
CLDND1-224ENST00000511667 COPB2P35606 906 aa15.97■□□□□ 0.15
CLDND1-224ENST00000511667 NT5C2P49902 561 aa15.97■□□□□ 0.15
CLDND1-224ENST00000511667 STAG1Q8WVM7 1258 aa15.97■□□□□ 0.15
CLDND1-224ENST00000511667 RILPL2Q969X0 211 aa15.97■□□□□ 0.15
CLDND1-224ENST00000511667 IL25Q9H293 177 aa15.97■□□□□ 0.15
CLDND1-224ENST00000511667 FEM1BQ9UK73 627 aa15.97■□□□□ 0.15
CLDND1-224ENST00000511667 DIS3Q9Y2L1 958 aaKnown RBP15.97■□□□□ 0.15
CLDND1-224ENST00000511667 DNAJC25-GNG10A0A024R161 153 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 HIP1O00291 1037 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 NMT2O60551 498 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 OAZ1P54368 228 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 SMAD3P84022 425 aaKnown RBP15.96■□□□□ 0.15
CLDND1-224ENST00000511667 ZNF792Q3KQV3 632 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 TTC22Q5TAA0 569 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 SLFN13Q68D06 897 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 RCSD1Q6JBY9 416 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 LRRC47Q8N1G4 583 aaKnown RBP15.96■□□□□ 0.15
CLDND1-224ENST00000511667 DSCC1Q9BVC3 393 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 TEX13BQ9BXU2 312 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 TTYH1Q9H313 450 aaPredicted RBP15.96■□□□□ 0.15
CLDND1-224ENST00000511667 PRKAG2Q9UGJ0 569 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 RIPK3Q9Y572 518 aa15.96■□□□□ 0.15
CLDND1-224ENST00000511667 CDH23Q9H251 3354 aa15.95■□□□□ 0.14
CLDND1-224ENST00000511667 FDX1P10109 184 aa15.95■□□□□ 0.14
CLDND1-224ENST00000511667 FCER1AP12319 257 aa15.95■□□□□ 0.14
CLDND1-224ENST00000511667 BMP3P12645 472 aa15.95■□□□□ 0.14
CLDND1-224ENST00000511667 MFAP1P55081 439 aaKnown RBP15.95■□□□□ 0.14
CLDND1-224ENST00000511667 AKNAD1Q5T1N1 836 aa15.95■□□□□ 0.14
CLDND1-224ENST00000511667 MFSD14CQ5VZR4 134 aa15.95■□□□□ 0.14
CLDND1-224ENST00000511667 TBC1D10CQ8IV04 446 aa15.95■□□□□ 0.14
CLDND1-224ENST00000511667 MAML3Q96JK9 1138 aa15.95■□□□□ 0.14
CLDND1-224ENST00000511667 PLXNA1Q9UIW2 1896 aa15.95■□□□□ 0.14
CLDND1-224ENST00000511667 ZNF536O15090 1300 aa15.94■□□□□ 0.14
CLDND1-224ENST00000511667 BDP1A6H8Y1 2624 aa15.94■□□□□ 0.14
CLDND1-224ENST00000511667 TSPY2A6NKD2 308 aa15.94■□□□□ 0.14
CLDND1-224ENST00000511667 CYP2C19P33261 490 aa15.94■□□□□ 0.14
CLDND1-224ENST00000511667 IRX6P78412 446 aaPredicted RBP15.94■□□□□ 0.14
CLDND1-224ENST00000511667 WDR78Q5VTH9 848 aa15.94■□□□□ 0.14
CLDND1-224ENST00000511667 CWC27Q6UX04 472 aaKnown RBP15.94■□□□□ 0.14
CLDND1-224ENST00000511667 BTNL9Q6UXG8 535 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms