RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 CNMDO75829 334 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 RPS6KB1P23443 525 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 MAPK4P31152 587 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 COPB2P35606 906 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 PSMC4P43686 418 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 OAZ1P54368 228 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 FGD1P98174 961 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 EXOSC10Q01780 885 aaKnown RBP15.02■□□□□ -0
COL6A6-203ENST00000511332 BTNL9Q6UXG8 535 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 SGMS1Q86VZ5 419 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 ZNF654Q8IZM8 581 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 SPATC1LQ9H0A9 340 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 EFCC1Q9HA90 598 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 UPF2Q9HAU5 1272 aaKnown RBP15.02■□□□□ -0
COL6A6-203ENST00000511332 CWC22Q9HCG8 908 aaKnown RBP15.02■□□□□ -0
COL6A6-203ENST00000511332 GPCPD1Q9NPB8 672 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 BTBD7Q9P203 1132 aa15.02■□□□□ -0
COL6A6-203ENST00000511332 FMNL1O95466 1100 aaPredicted RBP15.01□□□□□ -0.01
COL6A6-203ENST00000511332 SEC24BO95487 1268 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 CALM1P0DP23 149 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 CALM2P0DP24 149 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 CALM3P0DP25 149 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 HOXD10P28358 340 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 COL9A3Q14050 684 aaPredicted RBP15.01□□□□□ -0.01
COL6A6-203ENST00000511332 PLS1Q14651 629 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 GRM4Q14833 912 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 PKN2Q16513 984 aaKnown RBP15.01□□□□□ -0.01
COL6A6-203ENST00000511332 SYDE2Q5VT97 1194 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 POTEEQ6S8J3 1075 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 OTOP1Q7RTM1 612 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 SHCBP1Q8NEM2 672 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 COA7Q96BR5 231 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 TRIM47Q96LD4 638 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 MAP3K14Q99558 947 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 TEX13BQ9BXU2 312 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 LRRC2Q9BYS8 371 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 ARHGAP39Q9C0H5 1083 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 SLC38A10Q9HBR0 1119 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 SENP2Q9HC62 589 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 PRR12Q9ULL5 1215 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 TRIM17Q9Y577 477 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 SLC12A7Q9Y666 1083 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 CYP46A1Q9Y6A2 500 aa15.01□□□□□ -0.01
COL6A6-203ENST00000511332 ATP2A1O14983 1001 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 SLC25A27O95847 323 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 KIF5BP33176 963 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 PRMT2P55345 433 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 TROAPQ12815 778 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 TMEM132BQ14DG7 1078 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 SYNE3Q6ZMZ3 975 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 RUFY3Q7L099 469 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 REPS2Q8NFH8 660 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 CTCFLQ8NI51 663 aaPredicted RBP15□□□□□ -0.01
COL6A6-203ENST00000511332 IL17RAQ96F46 866 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 TCEANC2Q96MN5 208 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 ZSWIM6Q9HCJ5 1215 aa15□□□□□ -0.01
COL6A6-203ENST00000511332 GPHNQ9NQX3 736 aaPredicted RBP15□□□□□ -0.01
COL6A6-203ENST00000511332 ZNF214Q9UL59 606 aaPredicted RBP15□□□□□ -0.01
COL6A6-203ENST00000511332 PEX10O60683 326 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 GOLGA8HP0CJ92 632 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 CPA1P15085 419 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 SLC16A2P36021 539 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 Q3C1V9 767 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 WDR78Q5VTH9 848 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 SNRNP48Q6IEG0 339 aaKnown RBP14.99□□□□□ -0.01
COL6A6-203ENST00000511332 TTBK2Q6IQ55 1244 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 RIOX2Q8IUF8 465 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 FBXL16Q8N461 479 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 NUP133Q8WUM0 1156 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 SOCS4Q8WXH5 440 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 MOV10L1Q9BXT6 1211 aaKnown RBP14.99□□□□□ -0.01
COL6A6-203ENST00000511332 PORCNQ9H237 461 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 RANBP17Q9H2T7 1088 aaKnown RBP14.99□□□□□ -0.01
COL6A6-203ENST00000511332 MROH8Q9H579 483 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 PNMA2Q9UL42 364 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 IVNS1ABPQ9Y6Y0 642 aa14.99□□□□□ -0.01
COL6A6-203ENST00000511332 PALM3A6NDB9 673 aaPredicted RBP14.98□□□□□ -0.01
COL6A6-203ENST00000511332 KLRF2D3W0D1 207 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 DHX16O60231 1041 aaKnown RBP14.98□□□□□ -0.01
COL6A6-203ENST00000511332 ECM2O94769 699 aaPredicted RBP14.98□□□□□ -0.01
COL6A6-203ENST00000511332 CTGFP29279 349 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 STAT3P40763 770 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 RCAN1P53805 252 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 APOA5Q6Q788 366 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 Q6ZUG5 572 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 GPR142Q7Z601 462 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 PLEKHH3Q7Z736 793 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 MICU3Q86XE3 530 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 NCAPG2Q86XI2 1143 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 MYL10Q9BUA6 226 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 SRRDQ9UH36 339 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 MAD2L2Q9UI95 211 aa14.98□□□□□ -0.01
COL6A6-203ENST00000511332 SMCHD1A6NHR9 2005 aa14.97□□□□□ -0.01
COL6A6-203ENST00000511332 ICAM1P05362 532 aa14.97□□□□□ -0.01
COL6A6-203ENST00000511332 ERCC3P19447 782 aa14.97□□□□□ -0.01
COL6A6-203ENST00000511332 GNAQP50148 359 aa14.97□□□□□ -0.01
COL6A6-203ENST00000511332 CAP1Q01518 475 aa14.97□□□□□ -0.01
COL6A6-203ENST00000511332 FBXO46Q6PJ61 603 aaPredicted RBP14.97□□□□□ -0.01
COL6A6-203ENST00000511332 CPXCR1Q8N123 301 aa14.97□□□□□ -0.01
COL6A6-203ENST00000511332 BRF1Q92994 677 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms