RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 CNPY2Q9Y2B0 182 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 DDX49Q9Y6V7 483 aaKnown RBP9.31□□□□□ -0.92
SMAD1-209ENST00000511125 FOCADQ5VW36 1801 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 ITGBL1O95965 494 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 GJA5P36382 358 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 BACE1P56817 501 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 UBE2SQ16763 222 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 WDR78Q5VTH9 848 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 JAKMIP3Q5VZ66 844 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 TBC1D5Q92609 795 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 ANKS1AQ92625 1134 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 HOOK2Q96ED9 719 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 AGBL1Q96MI9 1066 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 RAVER2Q9HCJ3 691 aaKnown RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 BIN2Q9UBW5 565 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 PRR12Q9ULL5 1215 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 CTDP1Q9Y5B0 961 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 KIF3CO14782 793 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 PPP1R11O60927 126 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 SCG2P13521 617 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 HOXA13P31271 388 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 STAT2P52630 851 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 UBXN2AP68543 259 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 MAP3K10Q02779 954 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 CDC37Q16543 378 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 QRICH1Q2TAL8 776 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 ZNF784Q8NCA9 323 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 LLPHQ9BRT6 129 aaKnown RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 TMEM260Q9NX78 707 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 PPP2R3BQ9Y5P8 575 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 DEXIO95424 95 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 DDIT3P35638 169 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 ZNF157P51786 506 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 EARS2Q5JPH6 523 aaKnown RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 DIS3L2Q8IYB7 885 aaKnown RBP9.3□□□□□ -0.92
SMAD1-209ENST00000511125 MKL1Q969V6 931 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 ATG4CQ96DT6 458 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 TMOD4Q9NZQ9 345 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 ZNF112Q9UJU3 913 aa9.3□□□□□ -0.92
SMAD1-209ENST00000511125 USP17L15C9J2P7 530 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 USP17L13C9JLJ4 530 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 USP17L11C9JVI0 530 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 USP17L18D6R9N7 530 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 USP17L22D6RA61 530 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 USP17L17D6RBQ6 530 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 USP17L19D6RCP7 530 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 USP17L20D6RJB6 530 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 F13A1P00488 732 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 CYP2C8P10632 490 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 USP17L24Q0WX57 530 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 SYDE2Q5VT97 1194 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 USP17L6PQ6QN14 398 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 FCHSD1Q86WN1 690 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 FBXO18Q8NFZ0 1043 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 AFG3L2Q9Y4W6 797 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 PCDHA1Q9Y5I3 950 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 WDR33Q9C0J8 1336 aaKnown RBP9.29□□□□□ -0.92
SMAD1-209ENST00000511125 PRPF3O43395 683 aaKnown RBP9.29□□□□□ -0.92
SMAD1-209ENST00000511125 PRPF40AO75400 957 aaKnown RBP9.29□□□□□ -0.92
SMAD1-209ENST00000511125 BRD1O95696 1058 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 ALAS1P13196 640 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 NUCB2P80303 420 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 ASPRV1Q53RT3 343 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 ZIC5Q96T25 663 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 MTA3Q9BTC8 594 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 AS3MTQ9HBK9 375 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 MRVI1Q9Y6F6 885 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 SMCO2A6NFE2 343 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 GNAQP50148 359 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 PIK3AP1Q6ZUJ8 805 aa9.29□□□□□ -0.92
SMAD1-209ENST00000511125 PURBQ96QR8 312 aaKnown RBP9.29□□□□□ -0.92
SMAD1-209ENST00000511125 RNF26Q9BY78 433 aaPredicted RBP9.29□□□□□ -0.92
SMAD1-209ENST00000511125 MYH4Q9Y623 1939 aa9.28□□□□□ -0.92
SMAD1-209ENST00000511125 SMCHD1A6NHR9 2005 aa9.28□□□□□ -0.92
SMAD1-209ENST00000511125 PLIN4Q96Q06 1357 aa9.28□□□□□ -0.92
SMAD1-209ENST00000511125 CFBP00751 764 aa9.28□□□□□ -0.92
SMAD1-209ENST00000511125 PDCP20941 246 aa9.28□□□□□ -0.92
SMAD1-209ENST00000511125 NFKBIBQ15653 356 aa9.28□□□□□ -0.92
SMAD1-209ENST00000511125 GPATCH4Q5T3I0 446 aaKnown RBP9.28□□□□□ -0.92
SMAD1-209ENST00000511125 GZF1Q9H116 711 aaPredicted RBP9.28□□□□□ -0.92
SMAD1-209ENST00000511125 R3HDMLQ9H3Y0 253 aa9.28□□□□□ -0.92
SMAD1-209ENST00000511125 PFKFB3Q16875 520 aaPredicted RBP9.28□□□□□ -0.92
SMAD1-209ENST00000511125 ERO1BQ86YB8 467 aa9.28□□□□□ -0.92
SMAD1-209ENST00000511125 DCAF4Q8WV16 495 aa9.28□□□□□ -0.92
SMAD1-209ENST00000511125 SH2D4AQ9H788 454 aa9.28□□□□□ -0.92
SMAD1-209ENST00000511125 KIF3AQ9Y496 699 aa9.28□□□□□ -0.92
SMAD1-209ENST00000511125 BAG4O95429 457 aaKnown RBP9.27□□□□□ -0.92
SMAD1-209ENST00000511125 SNHG28P0DPA3 235 aa9.27□□□□□ -0.92
SMAD1-209ENST00000511125 SAFBQ15424 915 aaKnown RBP eCLIP9.27□□□□□ -0.92
SMAD1-209ENST00000511125 CYP4F22Q6NT55 531 aa9.27□□□□□ -0.92
SMAD1-209ENST00000511125 GMCL1P1Q8NEA9 526 aa9.27□□□□□ -0.92
SMAD1-209ENST00000511125 KIAA1683Q9H0B3 1180 aa9.27□□□□□ -0.92
SMAD1-209ENST00000511125 WNT7AO00755 349 aa9.27□□□□□ -0.93
SMAD1-209ENST00000511125 MARCKSP29966 332 aaPredicted RBP9.27□□□□□ -0.93
SMAD1-209ENST00000511125 NOVP48745 357 aa9.27□□□□□ -0.93
SMAD1-209ENST00000511125 GJA10Q969M2 543 aa9.27□□□□□ -0.93
SMAD1-209ENST00000511125 P2RX7Q99572 595 aaKnown RBP9.27□□□□□ -0.93
SMAD1-209ENST00000511125 STXBP3O00186 592 aa9.27□□□□□ -0.93
SMAD1-209ENST00000511125 ZBTB5O15062 677 aa9.27□□□□□ -0.93
SMAD1-209ENST00000511125 NSMFQ6X4W1 530 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms