RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 SMAD3P84022 425 aaKnown RBP27.35■■□□□ 1.97
SMAD5-207ENST00000511116 KLRC3Q07444 240 aa27.35■■□□□ 1.97
SMAD5-207ENST00000511116 C20orf194Q5TEA3 1177 aa27.35■■□□□ 1.97
SMAD5-207ENST00000511116 NUP88Q99567 741 aaPredicted RBP27.35■■□□□ 1.97
SMAD5-207ENST00000511116 TSEN34Q9BSV6 310 aaKnown RBP27.35■■□□□ 1.97
SMAD5-207ENST00000511116 SYNPO2Q9UMS6 1093 aa27.35■■□□□ 1.97
SMAD5-207ENST00000511116 A0A1W2PQ45 241 aaPredicted RBP27.34■■□□□ 1.97
SMAD5-207ENST00000511116 A0A1W2PQY0 241 aa27.34■■□□□ 1.97
SMAD5-207ENST00000511116 KIAA0355O15063 1070 aa27.34■■□□□ 1.97
SMAD5-207ENST00000511116 PRPF38AQ8NAV1 312 aaKnown RBP27.34■■□□□ 1.97
SMAD5-207ENST00000511116 MKL1Q969V6 931 aa27.34■■□□□ 1.97
SMAD5-207ENST00000511116 EPB41L4AQ9HCS5 686 aaPredicted RBP27.34■■□□□ 1.97
SMAD5-207ENST00000511116 RIPK3Q9Y572 518 aa27.34■■□□□ 1.97
SMAD5-207ENST00000511116 SNAI1O95863 264 aaPredicted RBP27.33■■□□□ 1.97
SMAD5-207ENST00000511116 CLTBP09497 229 aa27.33■■□□□ 1.97
SMAD5-207ENST00000511116 SNRNP48Q6IEG0 339 aaKnown RBP27.33■■□□□ 1.97
SMAD5-207ENST00000511116 ZNF467Q7Z7K2 595 aaPredicted RBP27.33■■□□□ 1.97
SMAD5-207ENST00000511116 KLHDC9Q8NEP7 349 aa27.33■■□□□ 1.97
SMAD5-207ENST00000511116 DCTPP1Q9H773 170 aa27.33■■□□□ 1.97
SMAD5-207ENST00000511116 MKNK2Q9HBH9 465 aa27.33■■□□□ 1.97
SMAD5-207ENST00000511116 CNPY2Q9Y2B0 182 aa27.33■■□□□ 1.97
SMAD5-207ENST00000511116 MYH4Q9Y623 1939 aa27.33■■□□□ 1.97
SMAD5-207ENST00000511116 PRUNE2Q8WUY3 3088 aa27.32■■□□□ 1.96
SMAD5-207ENST00000511116 RNF113AO15541 343 aaKnown RBP27.32■■□□□ 1.96
SMAD5-207ENST00000511116 ZFYP08048 801 aaPredicted RBP27.32■■□□□ 1.96
SMAD5-207ENST00000511116 CCSAPQ6IQ19 270 aaPredicted RBP27.32■■□□□ 1.96
SMAD5-207ENST00000511116 ANKRD33Q7Z3H0 272 aa27.32■■□□□ 1.96
SMAD5-207ENST00000511116 LENG1Q96BZ8 264 aaPredicted RBP27.32■■□□□ 1.96
SMAD5-207ENST00000511116 FAM161BQ96MY7 647 aa27.32■■□□□ 1.96
SMAD5-207ENST00000511116 TOX2Q96NM4 488 aa27.32■■□□□ 1.96
SMAD5-207ENST00000511116 VCANP13611 3396 aa27.32■■□□□ 1.96
SMAD5-207ENST00000511116 GPAA1O43292 621 aa27.31■■□□□ 1.96
SMAD5-207ENST00000511116 RAD21O60216 631 aa27.31■■□□□ 1.96
SMAD5-207ENST00000511116 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.31■■□□□ 1.96
SMAD5-207ENST00000511116 SEMA6BQ9H3T3 888 aa27.31■■□□□ 1.96
SMAD5-207ENST00000511116 SLC38A10Q9HBR0 1119 aa27.31■■□□□ 1.96
SMAD5-207ENST00000511116 SYNRGQ9UMZ2 1314 aa27.31■■□□□ 1.96
SMAD5-207ENST00000511116 PLIN4Q96Q06 1357 aa27.31■■□□□ 1.96
SMAD5-207ENST00000511116 GNAT2P19087 354 aa27.3■■□□□ 1.96
SMAD5-207ENST00000511116 FGD4Q96M96 766 aa27.3■■□□□ 1.96
SMAD5-207ENST00000511116 CDX2Q99626 313 aaPredicted RBP27.3■■□□□ 1.96
SMAD5-207ENST00000511116 MTMR4Q9NYA4 1195 aa27.3■■□□□ 1.96
SMAD5-207ENST00000511116 MINDY4BA8MYZ0 360 aa27.29■■□□□ 1.96
SMAD5-207ENST00000511116 CST5P28325 142 aaPredicted RBP27.29■■□□□ 1.96
SMAD5-207ENST00000511116 ACLYP53396 1101 aa27.29■■□□□ 1.96
SMAD5-207ENST00000511116 EPHB4P54760 987 aa27.29■■□□□ 1.96
SMAD5-207ENST00000511116 TTYH1Q9H313 450 aaPredicted RBP27.29■■□□□ 1.96
SMAD5-207ENST00000511116 CLIP2Q9UDT6 1046 aa27.29■■□□□ 1.96
SMAD5-207ENST00000511116 FAM184BQ9ULE4 1060 aa27.29■■□□□ 1.96
SMAD5-207ENST00000511116 MOXD2PA6NHM9 499 aa27.28■■□□□ 1.96
SMAD5-207ENST00000511116 DUSP11O75319 330 aaKnown RBP27.28■■□□□ 1.96
SMAD5-207ENST00000511116 OAZ1P54368 228 aa27.28■■□□□ 1.96
SMAD5-207ENST00000511116 FAAP100Q0VG06 881 aa27.28■■□□□ 1.96
SMAD5-207ENST00000511116 GMCL1P1Q8NEA9 526 aa27.28■■□□□ 1.96
SMAD5-207ENST00000511116 DDX11Q96FC9 970 aa27.28■■□□□ 1.96
SMAD5-207ENST00000511116 CEP95Q96GE4 821 aa27.28■■□□□ 1.96
SMAD5-207ENST00000511116 GPATCH3Q96I76 525 aa27.28■■□□□ 1.96
SMAD5-207ENST00000511116 COL25A1Q9BXS0 654 aaPredicted RBP27.28■■□□□ 1.96
SMAD5-207ENST00000511116 ZNF287Q9HBT7 754 aa27.28■■□□□ 1.96
SMAD5-207ENST00000511116 FEM1BQ9UK73 627 aa27.28■■□□□ 1.96
SMAD5-207ENST00000511116 TMEM265A0A087WTH1 108 aa27.27■■□□□ 1.96
SMAD5-207ENST00000511116 M0R2C6 588 aa27.27■■□□□ 1.96
SMAD5-207ENST00000511116 ZBED4O75132 1171 aa27.27■■□□□ 1.96
SMAD5-207ENST00000511116 MCM3APO60318 1980 aa27.27■■□□□ 1.96
SMAD5-207ENST00000511116 PQBP1O60828 265 aaKnown RBP27.26■■□□□ 1.95
SMAD5-207ENST00000511116 TSHZ3Q63HK5 1081 aa27.26■■□□□ 1.95
SMAD5-207ENST00000511116 STK11IPQ8N1F8 1099 aa27.26■■□□□ 1.95
SMAD5-207ENST00000511116 CHST13Q8NET6 341 aa27.26■■□□□ 1.95
SMAD5-207ENST00000511116 NUP133Q8WUM0 1156 aa27.26■■□□□ 1.95
SMAD5-207ENST00000511116 STARD7Q9NQZ5 370 aa27.26■■□□□ 1.95
SMAD5-207ENST00000511116 FBXO40Q9UH90 709 aa27.26■■□□□ 1.95
SMAD5-207ENST00000511116 PATL2C9JE40 543 aaKnown RBP27.25■■□□□ 1.95
SMAD5-207ENST00000511116 TTLL1O95922 423 aa27.25■■□□□ 1.95
SMAD5-207ENST00000511116 RAG1P15918 1043 aa27.25■■□□□ 1.95
SMAD5-207ENST00000511116 TDO2P48775 406 aa27.25■■□□□ 1.95
SMAD5-207ENST00000511116 IFNL3Q8IZI9 196 aa27.25■■□□□ 1.95
SMAD5-207ENST00000511116 ZNF444Q8N0Y2 327 aaPredicted RBP27.25■■□□□ 1.95
SMAD5-207ENST00000511116 CPXCR1Q8N123 301 aa27.25■■□□□ 1.95
SMAD5-207ENST00000511116 NEDD1Q8NHV4 660 aa27.25■■□□□ 1.95
SMAD5-207ENST00000511116 UPF3AQ9H1J1 476 aaKnown RBP27.25■■□□□ 1.95
SMAD5-207ENST00000511116 RAVER2Q9HCJ3 691 aaKnown RBP27.25■■□□□ 1.95
SMAD5-207ENST00000511116 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.25■■□□□ 1.95
SMAD5-207ENST00000511116 TBX21Q9UL17 535 aa27.25■■□□□ 1.95
SMAD5-207ENST00000511116 ELP1O95163 1332 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 MYADML2A6NDP7 307 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 ADCY6O43306 1168 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 PRDM1O75626 825 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 NKX3-2P78367 333 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 FPGSQ05932 587 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 ACVR2BQ13705 512 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 KCNA10Q16322 511 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 KIFC2Q96AC6 838 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 RNPC3Q96LT9 517 aaKnown RBP27.24■■□□□ 1.95
SMAD5-207ENST00000511116 KATNBL1Q9H079 304 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 ABHD16BQ9H3Z7 469 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 TMEM39AQ9NV64 488 aa27.24■■□□□ 1.95
SMAD5-207ENST00000511116 ZHX1Q9UKY1 873 aaPredicted RBP27.24■■□□□ 1.95
SMAD5-207ENST00000511116 SPTBN5Q9NRC6 3674 aaKnown RBP27.23■■□□□ 1.95
SMAD5-207ENST00000511116 DCDC2CA8MYV0 355 aa27.23■■□□□ 1.95
SMAD5-207ENST00000511116 FDX1P10109 184 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms