RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 SLC12A2P55011 1212 aa11.65□□□□□ -0.54
NEK1-206ENST00000510533 DPP8Q6V1X1 898 aaPredicted RBP11.65□□□□□ -0.54
NEK1-206ENST00000510533 NSMCE1Q8WV22 266 aa11.65□□□□□ -0.54
NEK1-206ENST00000510533 UBAP1LF5GYI3 381 aa11.65□□□□□ -0.54
NEK1-206ENST00000510533 MUM1Q2TAK8 710 aa11.65□□□□□ -0.54
NEK1-206ENST00000510533 MAP3K21Q5TCX8 1036 aa11.65□□□□□ -0.54
NEK1-206ENST00000510533 DPH5Q9H2P9 285 aa11.65□□□□□ -0.54
NEK1-206ENST00000510533 AFG3L2Q9Y4W6 797 aa11.65□□□□□ -0.54
NEK1-206ENST00000510533 EPN1Q9Y6I3 576 aaPredicted RBP11.65□□□□□ -0.54
NEK1-206ENST00000510533 HIP1RO75146 1068 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 RPN1P04843 607 aaKnown RBP11.64□□□□□ -0.55
NEK1-206ENST00000510533 APBA1Q02410 837 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 TCIRG1Q13488 830 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 GBP7Q8N8V2 638 aaPredicted RBP11.64□□□□□ -0.55
NEK1-206ENST00000510533 CLIC6Q96NY7 704 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 USH1CQ9Y6N9 552 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 ADCY9O60503 1353 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 FAM135BQ49AJ0 1406 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 N4BP1O75113 896 aaKnown RBP11.64□□□□□ -0.55
NEK1-206ENST00000510533 P4HA1P13674 534 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 CDC25BP30305 580 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 RFC1P35251 1148 aaPredicted RBP11.64□□□□□ -0.55
NEK1-206ENST00000510533 PPP2R5CQ13362 524 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 OTUD6AQ7L8S5 288 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 MIER3Q7Z3K6 550 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 GOLGA5Q8TBA6 731 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 PANK4Q9NVE7 773 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 A0A1W2PQ27 194 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 A0A1W2PQ64 194 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 A0A1W2PQD8 194 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 POLR2FP61218 127 aaKnown RBP11.64□□□□□ -0.55
NEK1-206ENST00000510533 TCP10Q12799 353 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 RABGGTAQ92696 567 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 PYCARDQ9ULZ3 195 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 CLIC4Q9Y696 253 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 TNKSO95271 1327 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 BTBD18B2RXH4 712 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 SCG2P13521 617 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 CTSWP56202 376 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 IRX4P78413 519 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 GABPAQ06546 454 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 MCTP2Q6DN12 878 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 GALNT17Q6IS24 598 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 NEK8Q86SG6 692 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 GAS2L3Q86XJ1 694 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 PPP4R1Q8TF05 950 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 GJA3Q9Y6H8 435 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 FAM170AA1A519 330 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 H2AFZP0C0S5 128 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 BSPRYQ5W0U4 402 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 H2AFVQ71UI9 128 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 TDRD7Q8NHU6 1098 aaKnown RBP11.64□□□□□ -0.55
NEK1-206ENST00000510533 PPP1R13BQ96KQ4 1090 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 GBP5Q96PP8 586 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 CARD10Q9BWT7 1032 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 PCDHA12Q9UN75 941 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 TRPC6Q9Y210 931 aa11.64□□□□□ -0.55
NEK1-206ENST00000510533 PDE6AP16499 860 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 FNBP4Q8N3X1 1017 aaPredicted RBP11.63□□□□□ -0.55
NEK1-206ENST00000510533 MICAL1Q8TDZ2 1067 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 TYW1Q9NV66 732 aaKnown RBP11.63□□□□□ -0.55
NEK1-206ENST00000510533 NOD1Q9Y239 953 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 RIPOR2Q9Y4F9 1068 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 PDIA3P30101 505 aaKnown RBP11.63□□□□□ -0.55
NEK1-206ENST00000510533 SH2D4BQ5SQS7 431 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 NLRX1Q86UT6 975 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 DEPTORQ8TB45 409 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 METTL14Q9HCE5 456 aaKnown RBP11.63□□□□□ -0.55
NEK1-206ENST00000510533 PDE11AQ9HCR9 933 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 GPHNQ9NQX3 736 aaPredicted RBP11.63□□□□□ -0.55
NEK1-206ENST00000510533 PTPRTO14522 1441 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 KAT6BQ8WYB5 2073 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 ARHGAP42A6NI28 874 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 THAP12O43422 761 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 COPB1P53618 953 aaKnown RBP11.63□□□□□ -0.55
NEK1-206ENST00000510533 SLFN12Q8IYM2 578 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 SYMPKQ92797 1274 aaKnown RBP11.63□□□□□ -0.55
NEK1-206ENST00000510533 PSTPIP2Q9H939 334 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 RTEL1Q9NZ71 1219 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 CDC23Q9UJX2 597 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 TTLL3Q9Y4R7 772 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 FGAP02671 866 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 LONP1P36776 959 aaKnown RBP11.63□□□□□ -0.55
NEK1-206ENST00000510533 SCRN1Q12765 414 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 PTPROQ16827 1216 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 HADHQ16836 314 aaKnown RBP11.63□□□□□ -0.55
NEK1-206ENST00000510533 TEKT1Q969V4 418 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 HAUS2Q9NVX0 235 aa11.63□□□□□ -0.55
NEK1-206ENST00000510533 MED23Q9ULK4 1368 aa11.62□□□□□ -0.55
NEK1-206ENST00000510533 DDAH1O94760 285 aa11.62□□□□□ -0.55
NEK1-206ENST00000510533 LIG3P49916 1009 aa11.62□□□□□ -0.55
NEK1-206ENST00000510533 PRR16Q569H4 304 aa11.62□□□□□ -0.55
NEK1-206ENST00000510533 PNMA1Q8ND90 353 aa11.62□□□□□ -0.55
NEK1-206ENST00000510533 HOOK2Q96ED9 719 aa11.62□□□□□ -0.55
NEK1-206ENST00000510533 SLC39A2Q9NP94 309 aa11.62□□□□□ -0.55
NEK1-206ENST00000510533 ST7Q9NRC1 585 aa11.62□□□□□ -0.55
NEK1-206ENST00000510533 CFAP43Q8NDM7 1665 aa11.62□□□□□ -0.55
NEK1-206ENST00000510533 SLC8A1P32418 973 aa11.62□□□□□ -0.55
NEK1-206ENST00000510533 VPS41P49754 854 aa11.62□□□□□ -0.55
NEK1-206ENST00000510533 FAM102BQ5T8I3 360 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms