RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	TRIM22	Q8IYM9	498 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	CCDC82	Q8N4S0	544 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	MS4A4A	Q96JQ5	239 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	TANGO6	Q9C0B7	1094 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	UBA5	Q9GZZ9	404 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	RBM27	Q9P2N5	1060 aa	Known RBP	13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	AGTPBP1	Q9UPW5	1226 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	SMC3	Q9UQE7	1217 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	PTPDC1	A2A3K4	754 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	MANSC4	A6NHS7	340 aa	Predicted RBP	13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	RASSF10	A6NK89	507 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	FAM155A	B1AL88	458 aa	Predicted RBP	13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	PRPF3	O43395	683 aa	Known RBP	13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	JAK2	O60674	1132 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	FMNL1	O95466	1100 aa	Predicted RBP	13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	HOXA7	P31268	230 aa	Predicted RBP	13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	SLC16A2	P36021	539 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	SLC4A3	P48751	1232 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	AKAP17A	Q02040	695 aa	Known RBP	13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	MKRN3	Q13064	507 aa	Known RBP	13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	IK	Q13123	557 aa	Predicted RBP	13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.87	□□□□□ -0.19	4e-61	■□□□□ 11.2
RACK1-223	ENST00000510199	SLC35G1	Q2M3R5	365 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	SYDE2	Q5VT97	1194 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	CATSPERG	Q6ZRH7	1159 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	ADGRF4	Q8IZF3	695 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	PRPF38A	Q8NAV1	312 aa	Known RBP	13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	PHKB	Q93100	1093 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	SLC26A6	Q9BXS9	759 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	CPVL	Q9H3G5	476 aa		13.87	□□□□□ -0.19
RACK1-223	ENST00000510199	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	CCL15-CCL14	A0A0B4J2E2	113 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	TESPA1	A2RU30	521 aa	Predicted RBP	13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	FLOT1	O75955	427 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	DEXI	O95424	95 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	GJB2	P29033	226 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	COG2	Q14746	738 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	CCL15	Q16663	113 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	DEFB115	Q30KQ5	88 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	TREML2	Q5T2D2	321 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	GPAT2	Q6NUI2	795 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	MTMR8	Q96EF0	704 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	RRP36	Q96EU6	259 aa	Known RBP	13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	SLF1	Q9BQI6	1058 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	JMJD4	Q9H9V9	463 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	VAT1L	Q9HCJ6	419 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	FOXD4L1	Q9NU39	408 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	FBXO28	Q9NVF7	368 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	ORC3	Q9UBD5	711 aa	Predicted RBP	13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	PPP1R9A	Q9ULJ8	1098 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	PRR12	Q9ULL5	1215 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	SLC45A1	Q9Y2W3	748 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	MYPN	Q86TC9	1320 aa		13.86	□□□□□ -0.19
RACK1-223	ENST00000510199	FDX1	P10109	184 aa		13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	FDPS	P14324	419 aa	Known RBP	13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	INHBE	P58166	350 aa		13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	ANKRD23	Q86SG2	305 aa		13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	SPRYD3	Q8NCJ5	442 aa		13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	BRI3BP	Q8WY22	251 aa		13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	WASF1	Q92558	559 aa		13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	KIFC2	Q96AC6	838 aa		13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	DDX11	Q96FC9	970 aa		13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	CWC22	Q9HCG8	908 aa	Known RBP	13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	KIF3A	Q9Y496	699 aa		13.85	□□□□□ -0.19
RACK1-223	ENST00000510199		V9GY48	417 aa	Predicted RBP	13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	MYH15	Q9Y2K3	1946 aa		13.85	□□□□□ -0.19
RACK1-223	ENST00000510199	PNMA6F	A0A0J9YX94	578 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	ZBTB5	O15062	677 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	DTNB	O60941	627 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	PPFIA3	O75145	1194 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	OSBP	P22059	807 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	DSG3	P32926	999 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	CYP4F22	Q6NT55	531 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	FAM184A	Q8NB25	1140 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	PIGS	Q96S52	555 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	RANBP17	Q9H2T7	1088 aa	Known RBP	13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	HOXC10	Q9NYD6	342 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	SEC63	Q9UGP8	760 aa	Known RBP	13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	PNMA3	Q9UL41	463 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	ADAMTS5	Q9UNA0	930 aa		13.84	□□□□□ -0.19
RACK1-223	ENST00000510199	hCG_1642624	A0A1W2PR95	340 aa		13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	BTBD19	C9JJ37	291 aa		13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	SCG2	P13521	617 aa		13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	IRX3	P78415	501 aa	Predicted RBP	13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	SREBF2	Q12772	1141 aa		13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	NOG	Q13253	232 aa		13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	PKN1	Q16512	942 aa		13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	CDC37	Q16543	378 aa	Predicted RBP	13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	PFKFB3	Q16875	520 aa	Predicted RBP	13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	HOMER1	Q86YM7	354 aa		13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	PIBF1	Q8WXW3	757 aa		13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	ZCCHC17	Q9NP64	241 aa	Known RBP	13.83	□□□□□ -0.2
RACK1-223	ENST00000510199	THSD7B	Q9C0I4	1608 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	TCHH	Q07283	1943 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	hCG_1984214	I3L0E3	225 aa		13.82	□□□□□ -0.2
RACK1-223	ENST00000510199	PDHX	O00330	501 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms