RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 NSUN4Q96CB9 384 aaKnown RBP10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 PURBQ96QR8 312 aaKnown RBP10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 KBTBD4Q9NVX7 518 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 MYH8P13535 1937 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 A0A1W2PQJ5 194 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 KLRC4O43908 158 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 EIF3JO75822 258 aaKnown RBP10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 KIF5BP33176 963 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 CRKLP46109 303 aaKnown RBP10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 RCSD1Q6JBY9 416 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 GIMAP8Q8ND71 665 aaPredicted RBP10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 EHBP1Q8NDI1 1231 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 SDR42E1Q8WUS8 393 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 NUP58Q9BVL2 599 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 BTG4Q9NY30 223 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 MKRN1Q9UHC7 482 aaKnown RBP10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 CTNND2Q9UQB3 1225 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 ZNF652Q9Y2D9 606 aa10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 REXO2Q9Y3B8 237 aaKnown RBP10.41□□□□□ -0.74
PDGFRA-208ENST00000509490 ABCB11O95342 1321 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 ADAMTS2O95450 1211 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 AFMP43652 599 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 GNAQP50148 359 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 ZNF569Q5MCW4 686 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 CMTR1Q8N1G2 835 aaKnown RBP10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 SLC35F6Q8N357 371 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 MB21D1Q8N884 522 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 GOLGA5Q8TBA6 731 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 NELFBQ8WX92 580 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 DHTKD1Q96HY7 919 aaPredicted RBP10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 FAM84BQ96KN1 310 aaPredicted RBP10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 AK8Q96MA6 479 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 MED4Q9NPJ6 270 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 PCDHA4Q9UN74 947 aa10.4□□□□□ -0.74
PDGFRA-208ENST00000509490 ANO9A1A5B4 782 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 CTAGE15A4D2H0 777 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 N4BP3O15049 544 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 CTAGE8P0CG41 777 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 SRGNP10124 158 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 SMARCA1P28370 1054 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 HNRNPH3P31942 346 aaKnown RBP10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 GRM4Q14833 912 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 ZNF174Q15697 407 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 PTPN21Q16825 1174 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 NAALADL2Q58DX5 795 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 WWC2Q6AWC2 1192 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 ARHGAP27Q6ZUM4 889 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 CTAGE6Q86UF2 777 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 ZSCAN29Q8IWY8 852 aaPredicted RBP10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 CTAGE4Q8IX94 777 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 CCDC170Q8IYT3 715 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 OR8K1Q8NGG5 319 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 PNKPQ96T60 521 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 IRX2Q9BZI1 471 aaPredicted RBP10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 DCP1AQ9NPI6 582 aaPredicted RBP10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 DISC1Q9NRI5 854 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 C10orf71Q711Q0 1435 aa10.4□□□□□ -0.75
PDGFRA-208ENST00000509490 CLSTN1O94985 981 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 NDUFA10O95299 355 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 HNRNPH2P55795 449 aaKnown RBP10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 SF3B2Q13435 895 aaKnown RBP10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 CAVIN4Q5BKX8 364 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 RRAGBQ5VZM2 374 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 BLIDQ8IZY5 108 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 LZTS2Q9BRK4 669 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 TOMM22Q9NS69 142 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 MYO6Q9UM54 1294 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 EPN1Q9Y6I3 576 aaPredicted RBP10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 SBF2Q86WG5 1849 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 MINDY4BA8MYZ0 360 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 H3BQF6 201 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 RNF225M0QZC1 329 aaPredicted RBP10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 DNM2P50570 870 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 TTI2Q6NXR4 508 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 CNNM4Q6P4Q7 775 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 ANKRD18AQ8IVF6 992 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 FAM71BQ8TC56 605 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 CRNKL1Q9BZJ0 848 aaKnown RBP10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 LZTFL1Q9NQ48 299 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 ADAM21Q9UKJ8 722 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 NAV1Q8NEY1 1877 aa10.39□□□□□ -0.75
PDGFRA-208ENST00000509490 SNAP23O00161 211 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 PRDM1O75626 825 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 PARP1P09874 1014 aaKnown RBP10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 KIF4BQ2VIQ3 1234 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 HSP90AA4PQ58FG1 418 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 EPC1Q9H2F5 836 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 MINPP1Q9UNW1 487 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 EIF3CLB5ME19 914 aaKnown RBP10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 PRLRP16471 622 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 KRT9P35527 623 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 PRCPP42785 496 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 NOVP48745 357 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 USP14P54578 494 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 STX17P56962 302 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 KRT83P78385 493 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 EIF3CQ99613 913 aaKnown RBP10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 FLT1P17948 1338 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 LOC102724428A0A0B4J2F2 783 aa10.38□□□□□ -0.75
PDGFRA-208ENST00000509490 LCA5LO95447 670 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms