RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 DPP9Q86TI2 863 aa19.03■□□□□ 0.64
PDLIM5-212ENST00000509333 U2AF1L4Q8WU68 220 aaKnown RBP19.03■□□□□ 0.64
PDLIM5-212ENST00000509333 MAP4K1Q92918 833 aa19.03■□□□□ 0.64
PDLIM5-212ENST00000509333 KIFC2Q96AC6 838 aa19.03■□□□□ 0.64
PDLIM5-212ENST00000509333 SHISA4Q96DD7 197 aa19.03■□□□□ 0.64
PDLIM5-212ENST00000509333 DEFB118Q96PH6 123 aa19.03■□□□□ 0.64
PDLIM5-212ENST00000509333 HMX1Q9NP08 348 aaPredicted RBP19.03■□□□□ 0.64
PDLIM5-212ENST00000509333 NEDD4P46934 1319 aa19.02■□□□□ 0.64
PDLIM5-212ENST00000509333 PDE4DIPQ5VU43 2346 aa19.02■□□□□ 0.64
PDLIM5-212ENST00000509333 B4E1Z4 1266 aa19.02■□□□□ 0.64
PDLIM5-212ENST00000509333 KDM4AO75164 1064 aa19.02■□□□□ 0.64
PDLIM5-212ENST00000509333 FDX1P10109 184 aa19.02■□□□□ 0.64
PDLIM5-212ENST00000509333 ADORA2AP29274 412 aa19.02■□□□□ 0.64
PDLIM5-212ENST00000509333 KCTD1Q719H9 257 aa19.02■□□□□ 0.64
PDLIM5-212ENST00000509333 DGKHQ86XP1 1220 aa19.02■□□□□ 0.64
PDLIM5-212ENST00000509333 APBA2Q99767 749 aa19.02■□□□□ 0.64
PDLIM5-212ENST00000509333 ZKSCAN3Q9BRR0 538 aa19.02■□□□□ 0.64
PDLIM5-212ENST00000509333 CRISPLD2Q9H0B8 497 aa19.02■□□□□ 0.64
PDLIM5-212ENST00000509333 MYH4Q9Y623 1939 aa19.02■□□□□ 0.63
PDLIM5-212ENST00000509333 BRCA2P51587 3418 aa19.02■□□□□ 0.63
PDLIM5-212ENST00000509333 FCER1AP12319 257 aa19.01■□□□□ 0.63
PDLIM5-212ENST00000509333 ZKSCAN1P17029 563 aaPredicted RBP19.01■□□□□ 0.63
PDLIM5-212ENST00000509333 CAPN2P17655 700 aa19.01■□□□□ 0.63
PDLIM5-212ENST00000509333 BMP2KLQ5H9B9 411 aa19.01■□□□□ 0.63
PDLIM5-212ENST00000509333 FAM160B2Q86V87 743 aa19.01■□□□□ 0.63
PDLIM5-212ENST00000509333 CPXCR1Q8N123 301 aa19.01■□□□□ 0.63
PDLIM5-212ENST00000509333 DCAF4Q8WV16 495 aa19.01■□□□□ 0.63
PDLIM5-212ENST00000509333 TEX13BQ9BXU2 312 aa19.01■□□□□ 0.63
PDLIM5-212ENST00000509333 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.01■□□□□ 0.63
PDLIM5-212ENST00000509333 RAVER2Q9HCJ3 691 aaKnown RBP19.01■□□□□ 0.63
PDLIM5-212ENST00000509333 TNRC18O15417 2968 aaPredicted RBP19■□□□□ 0.63
PDLIM5-212ENST00000509333 TFRCP02786 760 aaKnown RBP19■□□□□ 0.63
PDLIM5-212ENST00000509333 CYP21A2P08686 494 aa19■□□□□ 0.63
PDLIM5-212ENST00000509333 PRKAR2AP13861 404 aaKnown RBP19■□□□□ 0.63
PDLIM5-212ENST00000509333 STAT2P52630 851 aa19■□□□□ 0.63
PDLIM5-212ENST00000509333 OAZ1P54368 228 aa19■□□□□ 0.63
PDLIM5-212ENST00000509333 CCDC178Q5BJE1 867 aa19■□□□□ 0.63
PDLIM5-212ENST00000509333 TTBK2Q6IQ55 1244 aa19■□□□□ 0.63
PDLIM5-212ENST00000509333 BTNL9Q6UXG8 535 aa19■□□□□ 0.63
PDLIM5-212ENST00000509333 UBE2Q1Q7Z7E8 422 aa19■□□□□ 0.63
PDLIM5-212ENST00000509333 KRT23Q9C075 422 aa19■□□□□ 0.63
PDLIM5-212ENST00000509333 U3KPZ7 1027 aaPredicted RBP19■□□□□ 0.63
PDLIM5-212ENST00000509333 COPB2P35606 906 aa18.99■□□□□ 0.63
PDLIM5-212ENST00000509333 MFSD14CQ5VZR4 134 aa18.99■□□□□ 0.63
PDLIM5-212ENST00000509333 SNRNP48Q6IEG0 339 aaKnown RBP18.99■□□□□ 0.63
PDLIM5-212ENST00000509333 RASGRP2Q7LDG7 609 aa18.99■□□□□ 0.63
PDLIM5-212ENST00000509333 ZSCAN10Q96SZ4 725 aaPredicted RBP18.99■□□□□ 0.63
PDLIM5-212ENST00000509333 MMP19Q99542 508 aa18.99■□□□□ 0.63
PDLIM5-212ENST00000509333 PRR12Q9ULL5 1215 aa18.99■□□□□ 0.63
PDLIM5-212ENST00000509333 MTMR7Q9Y216 660 aa18.99■□□□□ 0.63
PDLIM5-212ENST00000509333 CTDP1Q9Y5B0 961 aaPredicted RBP18.99■□□□□ 0.63
PDLIM5-212ENST00000509333 PARP14Q460N5 1801 aa18.99■□□□□ 0.63
PDLIM5-212ENST00000509333 ZNF536O15090 1300 aa18.99■□□□□ 0.63
PDLIM5-212ENST00000509333 SNHG28P0DPA3 235 aa18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 PDHBP11177 359 aa18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 CCND3P30281 292 aaPredicted RBP18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 CYP2C19P33261 490 aa18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 ZNF792Q3KQV3 632 aa18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 OLFML2BQ68BL8 750 aa18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 IQCA1Q86XH1 822 aa18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 ESYT1Q9BSJ8 1104 aa18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 CNNM2Q9H8M5 875 aa18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 SLC5A4Q9NY91 659 aa18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 DIS3Q9Y2L1 958 aaKnown RBP18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 ZNFX1Q9P2E3 1918 aaKnown RBP18.98■□□□□ 0.63
PDLIM5-212ENST00000509333 PGK2P07205 417 aa18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 SLC4A3P48751 1232 aa18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 KCTD2Q14681 263 aa18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 LHX8Q68G74 356 aa18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 CYB5R4Q7L1T6 521 aa18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 ENAHQ8N8S7 591 aaPredicted RBP18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 TRPV1Q8NER1 839 aa18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 AGBL1Q96MI9 1066 aa18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 LSG1Q9H089 658 aaKnown RBP18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 ISY1Q9ULR0 285 aaKnown RBP18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 TAF6LQ9Y6J9 622 aa18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 MKI67P46013 3256 aaKnown RBP18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 A0A0G2JMZ2 1700 aa18.97■□□□□ 0.63
PDLIM5-212ENST00000509333 RBBP6Q7Z6E9 1792 aaKnown RBP18.96■□□□□ 0.63
PDLIM5-212ENST00000509333 NEFLP07196 543 aa18.96■□□□□ 0.63
PDLIM5-212ENST00000509333 SLC16A2P36021 539 aa18.96■□□□□ 0.63
PDLIM5-212ENST00000509333 SNAP25P60880 206 aa18.96■□□□□ 0.63
PDLIM5-212ENST00000509333 ZNF543Q08ER8 600 aa18.96■□□□□ 0.63
PDLIM5-212ENST00000509333 CHST13Q8NET6 341 aa18.96■□□□□ 0.63
PDLIM5-212ENST00000509333 MAML3Q96JK9 1138 aa18.96■□□□□ 0.63
PDLIM5-212ENST00000509333 GPCPD1Q9NPB8 672 aa18.96■□□□□ 0.63
PDLIM5-212ENST00000509333 OGDHLQ9ULD0 1010 aa18.96■□□□□ 0.63
PDLIM5-212ENST00000509333 COL11A1P12107 1806 aaPredicted RBP18.95■□□□□ 0.62
PDLIM5-212ENST00000509333 DNAJC25-GNG10A0A024R161 153 aa18.95■□□□□ 0.62
PDLIM5-212ENST00000509333 E7EWF7 191 aa18.95■□□□□ 0.62
PDLIM5-212ENST00000509333 MNX1P50219 401 aaPredicted RBP18.95■□□□□ 0.62
PDLIM5-212ENST00000509333 IKQ13123 557 aaPredicted RBP18.95■□□□□ 0.62
PDLIM5-212ENST00000509333 CCDC96Q2M329 555 aa18.95■□□□□ 0.62
PDLIM5-212ENST00000509333 PRAMEF19Q5SWL8 479 aa18.95■□□□□ 0.62
PDLIM5-212ENST00000509333 KIAA1211Q6ZU35 1233 aa18.95■□□□□ 0.62
PDLIM5-212ENST00000509333 RBM8AQ9Y5S9 174 aaKnown RBP18.95■□□□□ 0.62
PDLIM5-212ENST00000509333 SEC23AQ15436 765 aa18.94■□□□□ 0.62
PDLIM5-212ENST00000509333 SYDE2Q5VT97 1194 aa18.94■□□□□ 0.62
PDLIM5-212ENST00000509333 ERICH6BQ5W0A0 696 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms