RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 TSEN34Q9BSV6 310 aaKnown RBP4.8□□□□□ -1.64
RNF4-211ENST00000509206 WDR18Q9BV38 432 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 PUS3Q9BZE2 481 aaKnown RBP4.8□□□□□ -1.64
RNF4-211ENST00000509206 SPC25Q9HBM1 224 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 LIMD1Q9UGP4 676 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 LTBP2Q14767 1821 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 PLXNA1Q9UIW2 1896 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 MAST2Q6P0Q8 1798 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 MOXD2PA6NHM9 499 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 SMAPO00193 183 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 RAD21O60216 631 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 KRT37O76014 449 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 PDE8BO95263 885 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 CA3P07451 260 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 ACTN1P12814 892 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 IL9P15248 144 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 ADORA2AP29274 412 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 CYP2C18P33260 490 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 BTDP43251 543 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 ACLYP53396 1101 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 CASP7P55210 303 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 PLS1Q14651 629 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 TUSC1Q2TAM9 212 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 NBPF20Q3BBV1 942 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 LEXMQ3ZCV2 418 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 SH3BP5LQ7L8J4 393 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 CRACR2BQ8N4Y2 399 aaPredicted RBP4.79□□□□□ -1.64
RNF4-211ENST00000509206 C8orf58Q8NAV2 365 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 RDH13Q8NBN7 331 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 PCSK9Q8NBP7 692 aaKnown RBP4.79□□□□□ -1.64
RNF4-211ENST00000509206 ANKK1Q8NFD2 765 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 PBXIP1Q96AQ6 731 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 PCGF6Q9BYE7 350 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 UBE2ZQ9H832 354 aaPredicted RBP4.79□□□□□ -1.64
RNF4-211ENST00000509206 SEPT9Q9UHD8 586 aaPredicted RBP4.79□□□□□ -1.64
RNF4-211ENST00000509206 TBX21Q9UL17 535 aa4.79□□□□□ -1.64
RNF4-211ENST00000509206 PRRC2BQ5JSZ5 2229 aaKnown RBP4.78□□□□□ -1.64
RNF4-211ENST00000509206 A0A0U1RQG5 324 aaPredicted RBP4.78□□□□□ -1.64
RNF4-211ENST00000509206 BHMG1C9JSJ3 638 aaPredicted RBP4.78□□□□□ -1.64
RNF4-211ENST00000509206 ARVCFO00192 962 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 SPTLC1O15269 473 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 AKR1A1P14550 325 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 PRDX5P30044 214 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 USP14P54578 494 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 CCL23P55773 120 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 GRB10Q13322 594 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 WDR43Q15061 677 aaKnown RBP eCLIP4.78□□□□□ -1.64
RNF4-211ENST00000509206 PUM3Q15397 648 aaKnown RBP4.78□□□□□ -1.64
RNF4-211ENST00000509206 ZYXQ15942 572 aaKnown RBP4.78□□□□□ -1.64
RNF4-211ENST00000509206 KCNA10Q16322 511 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 TMEM259Q4ZIN3 620 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 SPTY2D1Q68D10 685 aaPredicted RBP4.78□□□□□ -1.64
RNF4-211ENST00000509206 LAPTM4BQ86VI4 370 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 NCAPG2Q86XI2 1143 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 BANK1Q8NDB2 785 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 PRSS33Q8NF86 280 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 WNT2BQ93097 391 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 RUNDC1Q96C34 613 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 CRBNQ96SW2 442 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 NOL10Q9BSC4 688 aaKnown RBP4.78□□□□□ -1.64
RNF4-211ENST00000509206 HIPK3Q9H422 1215 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 FAM86C1Q9NVL1 165 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 IFT57Q9NWB7 429 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 LMCD1Q9NZU5 365 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 ABCF2Q9UG63 623 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 NRBP1Q9UHY1 535 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 HERC5Q9UII4 1024 aaKnown RBP4.78□□□□□ -1.64
RNF4-211ENST00000509206 DENND2AQ9ULE3 1009 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 CNPY2Q9Y2B0 182 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 CACNA1BQ00975 2339 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 MYH3P11055 1940 aa4.78□□□□□ -1.64
RNF4-211ENST00000509206 ZFHX2Q9C0A1 2572 aaPredicted RBP4.77□□□□□ -1.65
RNF4-211ENST00000509206 ELP1O95163 1332 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 CLSPNQ9HAW4 1339 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 COBLO75128 1261 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 CNMDO75829 334 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 GDF11O95390 407 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 LDHCP07864 332 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 C6orf222P0C671 652 aaPredicted RBP4.77□□□□□ -1.65
RNF4-211ENST00000509206 FCER1AP12319 257 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 ERCC3P19447 782 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 ATF7IPQ6VMQ6 1270 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 CATSPERGQ6ZRH7 1159 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 G2E3Q7L622 706 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.77□□□□□ -1.65
RNF4-211ENST00000509206 LPIN2Q92539 896 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 ANKS1AQ92625 1134 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 POM121Q96HA1 1249 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 DDX4Q9NQI0 724 aaKnown RBP4.77□□□□□ -1.65
RNF4-211ENST00000509206 SNRKQ9NRH2 765 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 GINM1Q9NU53 330 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 HOXC10Q9NYD6 342 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 PI4KBQ9UBF8 816 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 HCSTQ9UBK5 93 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 FAM184BQ9ULE4 1060 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 ATRNL1Q5VV63 1379 aa4.77□□□□□ -1.65
RNF4-211ENST00000509206 GAKO14976 1311 aa4.76□□□□□ -1.65
RNF4-211ENST00000509206 RLFQ13129 1914 aa4.76□□□□□ -1.65
RNF4-211ENST00000509206 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.76□□□□□ -1.65
RNF4-211ENST00000509206 SOWAHBA6NEL2 793 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms