RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.15□□□□□ -0.94
NR1I3-226ENST00000508740 PI4KBQ9UBF8 816 aa9.15□□□□□ -0.94
NR1I3-226ENST00000508740 ZNRF3Q9ULT6 936 aa9.15□□□□□ -0.94
NR1I3-226ENST00000508740 NAV1Q8NEY1 1877 aa9.15□□□□□ -0.95
NR1I3-226ENST00000508740 IQCA1LA6NCM1 817 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 DDTLA6NHG4 134 aaPredicted RBP9.14□□□□□ -0.95
NR1I3-226ENST00000508740 USP17L5A8MUK1 530 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 CTAGE5O15320 804 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 ENTPD3O75355 529 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 CMA1P23946 247 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 MARCKSP29966 332 aaPredicted RBP9.14□□□□□ -0.95
NR1I3-226ENST00000508740 NLRP5P59047 1200 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 NPY5RQ15761 445 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 PPP4R3BQ5MIZ7 849 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 METTL16Q86W50 562 aaKnown RBP9.14□□□□□ -0.95
NR1I3-226ENST00000508740 NIM1KQ8IY84 436 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 SPZ1Q9BXG8 430 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 TDRD3Q9H7E2 651 aaKnown RBP9.14□□□□□ -0.95
NR1I3-226ENST00000508740 CABP5Q9NP86 173 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 SH3GLB2Q9NR46 395 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 HDAC9Q9UKV0 1011 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 MTMR7Q9Y216 660 aa9.14□□□□□ -0.95
NR1I3-226ENST00000508740 LTBP3Q9NS15 1303 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 FAM237AA0A1B0GTK4 181 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 A0A1B0GVL5 298 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 KLRF2D3W0D1 207 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 CYTH3O43739 400 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 KINO60870 393 aaKnown RBP9.13□□□□□ -0.95
NR1I3-226ENST00000508740 TTLL1O95922 423 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 GOLGA8HP0CJ92 632 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 CCDC192P0DO97 292 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 CTCFP49711 727 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-226ENST00000508740 NDUFA8P51970 172 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 UVSSAQ2YD98 709 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 CERKLQ49MI3 558 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-226ENST00000508740 USP17L2Q6R6M4 530 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 ZSCAN29Q8IWY8 852 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-226ENST00000508740 CKAP2LQ8IYA6 745 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 FMR1NBQ8N0W7 255 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-226ENST00000508740 FAM177A1Q8N128 213 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-226ENST00000508740 OGFOD1Q8N543 542 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 RNF214Q8ND24 703 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 AGBL3Q8NEM8 1001 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 PIBF1Q8WXW3 757 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 ANP32BQ92688 251 aaKnown RBP9.13□□□□□ -0.95
NR1I3-226ENST00000508740 TNFRSF25Q93038 417 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 TAOK3Q9H2K8 898 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 DNAJC18Q9H819 358 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 PCDH10Q9P2E7 1040 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 CLIP2Q9UDT6 1046 aa9.13□□□□□ -0.95
NR1I3-226ENST00000508740 DDX60LQ5H9U9 1706 aaKnown RBP9.13□□□□□ -0.95
NR1I3-226ENST00000508740 SCN9AQ15858 1988 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 DICER1Q9UPY3 1922 aaKnown RBP9.12□□□□□ -0.95
NR1I3-226ENST00000508740 TRIM75PA6NK02 468 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 MPHOSPH10O00566 681 aaKnown RBP9.12□□□□□ -0.95
NR1I3-226ENST00000508740 CUTAO60888 179 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 SLC34A2O95436 690 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 SLURP2P0DP57 97 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 SNHG28P0DPA3 235 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 PDHBP11177 359 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 CALML3P27482 149 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 TYRO3Q06418 890 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 CXCL9Q07325 125 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 DLGAP5Q15398 846 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 ASPRV1Q53RT3 343 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 EARS2Q5JPH6 523 aaKnown RBP9.12□□□□□ -0.95
NR1I3-226ENST00000508740 GALNT17Q6IS24 598 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 TATDN1Q6P1N9 297 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
NR1I3-226ENST00000508740 MTMR14Q8NCE2 650 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 MKL1Q969V6 931 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 TRIM34Q9BYJ4 488 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 BARHL2Q9NY43 387 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 TMOD2Q9NZR1 351 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 ZNF70Q9UC06 446 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-226ENST00000508740 NOL7Q9UMY1 257 aaKnown RBP9.12□□□□□ -0.95
NR1I3-226ENST00000508740 PCDHA4Q9UN74 947 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 CEP131Q9UPN4 1083 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 PCDHB6Q9Y5E3 794 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 MORC2Q9Y6X9 1032 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-226ENST00000508740 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 ATRNL1Q5VV63 1379 aa9.12□□□□□ -0.95
NR1I3-226ENST00000508740 CDK5RAP2Q96SN8 1893 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 FAM205CA6NFA0 338 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 STXBP3O00186 592 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 ZNF202O95125 648 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 BMP15O95972 392 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 PFKFB1P16118 471 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 ATP2B1P20020 1258 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 PTPREP23469 700 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 TRAPPC10P48553 1259 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 EIF6P56537 245 aaKnown RBP9.11□□□□□ -0.95
NR1I3-226ENST00000508740 RASSF7Q02833 373 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 CCDC173Q0VFZ6 552 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 FKBP1CQ5VVH2 108 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 RESP18Q5W5W9 173 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 WWC2Q6AWC2 1192 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 CIAPIN1Q6FI81 312 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 TYW1BQ6NUM6 668 aa9.11□□□□□ -0.95
NR1I3-226ENST00000508740 SHC4Q6S5L8 630 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms