RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 KIF13BQ9NQT8 1826 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 ARFGEF1Q9Y6D6 1849 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 TJP1Q07157 1748 aa4.83□□□□□ -1.64
HMGN1P11-201ENST00000508668 RNF123Q5XPI4 1314 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 MAP3K15Q6ZN16 1313 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 A0A096LPE4 126 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 A0A1W2PPZ6 126 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 H7C1D1 291 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 LINC01387J3KSC0 135 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 KCNQ3O43525 872 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 DDX58O95786 925 aaKnown RBP4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 CTCFP49711 727 aaPredicted RBP4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 FCGRTP55899 365 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 DEFB115Q30KQ5 88 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 TMC4Q7Z404 712 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 BSNDQ8WZ55 320 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 FAM161BQ96MY7 647 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 EYA3Q99504 573 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 MUC3BQ9H195 1237 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 ZNF408Q9H9D4 720 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 BABAM1Q9NWV8 329 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 NOP53Q9NZM5 478 aaKnown RBP4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 PARP2Q9UGN5 583 aa4.82□□□□□ -1.64
HMGN1P11-201ENST00000508668 CEMIPQ8WUJ3 1361 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 SH3TC1Q8TE82 1336 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 A0A0A0MRY4 1105 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 SPDYE3A6NKU9 549 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 BBOX1O75936 387 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 GNA15P30679 374 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 NEXNQ0ZGT2 675 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 TRIM28Q13263 835 aaKnown RBP4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 PRRT3Q5FWE3 981 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 DTHD1Q6ZMT9 781 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 USP50Q70EL3 339 aaPredicted RBP4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 CNTROBQ8N137 903 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 CACTIN-AS1Q8N1I8 211 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 JMYQ8N9B5 988 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 RGS22Q8NE09 1264 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 GLIS3Q8NEA6 775 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 SLC7A3Q8WY07 619 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 CRAMP1Q96RY5 1269 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 PSMD1Q99460 953 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 STK31Q9BXU1 1019 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 OSBPL7Q9BZF2 842 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 ADAM19Q9H013 955 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 VPS33BQ9H267 617 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 TAF1DQ9H5J8 278 aaPredicted RBP4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 ABCB6Q9NP58 842 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 PPP4R2Q9NY27 417 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 DBF4Q9UBU7 674 aaPredicted RBP4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 SOX13Q9UN79 622 aa4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 MYH14Q7Z406 1995 aaKnown RBP4.81□□□□□ -1.64
HMGN1P11-201ENST00000508668 WDR90Q96KV7 1748 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 TMEM238LA0A1B0GVL6 79 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 PRAMEF22A3QJZ6 481 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 H3BRJ5 948 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 COL8A1P27658 744 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 EIF4A1P60842 406 aaKnown RBP4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 RAC1P63000 192 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 PSMD2Q13200 908 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 DDX10Q13206 875 aaKnown RBP4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 HLFQ16534 295 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 MAP1SQ66K74 1059 aaPredicted RBP4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 CIAPIN1Q6FI81 312 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 FAM117BQ6P1L5 589 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 COPS6Q7L5N1 327 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 VN1R5Q7Z5H4 357 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 DNAJC5GQ8N7S2 189 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 RUNDC1Q96C34 613 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 DCPSQ96C86 337 aaKnown RBP4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 ZC3H12CQ9C0D7 883 aaKnown RBP4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 C12orf49Q9H741 205 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 MRS2Q9HD23 443 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 ADARB2Q9NS39 739 aaKnown RBP4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 HYPKQ9NX55 129 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 ZNRF3Q9ULT6 936 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 AKAP2Q9Y2D5 859 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 TIAM2Q8IVF5 1701 aa4.8□□□□□ -1.64
HMGN1P11-201ENST00000508668 AFDNP55196 1824 aaKnown RBP4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 MYBBP1AQ9BQG0 1328 aaKnown RBP4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 UTRNP46939 3433 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 CA12O43570 354 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 DEAF1O75398 565 aaPredicted RBP4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 ZNF16P17020 682 aaPredicted RBP4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 EIF4BP23588 611 aaKnown RBP4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 NF2P35240 595 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 KCNJ4P48050 445 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 PRELPP51888 382 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 IKBKEQ14164 716 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 AOC3Q16853 763 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 SUSD4Q5VX71 490 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 HGSNATQ68CP4 663 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 TTLL7Q6ZT98 887 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 CDC37L1Q7L3B6 337 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 SP8Q8IXZ3 490 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 CCDC146Q8IYE0 955 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 FMR1NBQ8N0W7 255 aaPredicted RBP4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 C2orf69Q8N8R5 385 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 XAGE3Q8WTP9 111 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 THUMPD2Q9BTF0 503 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms