RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 AMIGO3Q86WK7 504 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 CCNJLQ8IV13 435 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 PI4KAP1Q8N8J0 262 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 CCDC191Q8NCU4 936 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 ASAP3Q8TDY4 903 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 GIPC2Q8TF65 315 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 DNAAF4Q8WXU2 420 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 METTL22Q9BUU2 404 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 BHLHE41Q9C0J9 482 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 NYXQ9GZU5 481 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 PXDNLA1KZ92 1463 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 ANKRD36CQ5JPF3 1778 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 PNMA6FA0A0J9YX94 578 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 FSCN2O14926 492 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 ADAM11O75078 769 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 BCAR3O75815 825 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 ALDH1L1O75891 902 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 WISP1O95388 367 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 CENPBP07199 599 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 PTPRAP18433 802 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 POLD1P28340 1107 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 CCT4P50991 539 aaKnown RBP6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 FGD1P98174 961 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 FOXD4L6Q3SYB3 417 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 FOXD4L3Q6VB84 417 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 ATF7IPQ6VMQ6 1270 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 TPTE2Q6XPS3 522 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 G2E3Q7L622 706 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 ALYREFQ86V81 257 aaKnown RBP6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 ZNF34Q8IZ26 560 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 DTWD1Q8N5C7 304 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 GLIS3Q8NEA6 775 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 LINS1Q8NG48 757 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 LENG1Q96BZ8 264 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 ISCA1Q9BUE6 129 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 CHMP4BQ9H444 224 aaKnown RBP6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 LIN7BQ9HAP6 207 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 SPON1Q9HCB6 807 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 NOB1Q9ULX3 412 aaKnown RBP6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 HDAC5Q9UQL6 1122 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 MAP3K2Q9Y2U5 619 aa6.9□□□□□ -1.3
HMGB1P44-201ENST00000508597 ARFGEF2Q9Y6D5 1785 aa6.9□□□□□ -1.31
HMGB1P44-201ENST00000508597 TCERG1O14776 1098 aaKnown RBP6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 MAPK8P45983 427 aa6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 PDE3AQ14432 1141 aa6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 MBTPS1Q14703 1052 aa6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 SUZ12Q15022 739 aaKnown RBP6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 ENOX2Q16206 610 aaKnown RBP6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 HLFQ16534 295 aa6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 ZNF423Q2M1K9 1284 aa6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 DNAJC25Q9H1X3 360 aa6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 SRP68Q9UHB9 627 aaKnown RBP6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 NIP7Q9Y221 180 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 ADCY9O60503 1353 aa6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 CARMIL3Q8ND23 1372 aa6.89□□□□□ -1.31
HMGB1P44-201ENST00000508597 ABCC4O15439 1325 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 A0A096LPE4 126 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 A0A1W2PPZ6 126 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 UNCXA6NJT0 531 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 MSTNO14793 375 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 DOC2BQ14184 412 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 ADGRE1Q14246 886 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 GRM2Q14416 872 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 NFIXQ14938 502 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 BEND3Q5T5X7 828 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 TBC1D9BQ66K14 1250 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 INTS3Q68E01 1043 aaKnown RBP6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 NLRP10Q86W26 655 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 FTSJ3Q8IY81 847 aaKnown RBP6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 DZIP1LQ8IYY4 767 aaKnown RBP6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 AGGF1Q8N302 714 aaeCLIP6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 SLC7A3Q8WY07 619 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 BSNDQ8WZ55 320 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 UTP14AQ9BVJ6 771 aaKnown RBP6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 SRCIN1Q9C0H9 1055 aa6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 CWC25Q9NXE8 425 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P44-201ENST00000508597 N4BP2Q86UW6 1770 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 NRXN2Q9P2S2 1712 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 SH3TC1Q8TE82 1336 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 CDHR2Q9BYE9 1310 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 H3BRJ5 948 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 POLRMTO00411 1230 aaKnown RBP6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 ZBTB7AO95365 584 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 SERPINB2P05120 415 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 PCCAP05165 728 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 NEFLP07196 543 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 MMP10P09238 476 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 TRIM27P14373 513 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 NOS3P29474 1203 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 IREB2P48200 963 aaKnown RBP6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 ST5P78524 1137 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 TAGLNQ01995 201 aaKnown RBP6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 GCKRQ14397 625 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 SLC10A5Q5PT55 438 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 SLC4A10Q6U841 1118 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 IGF2-ASQ6U949 168 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 SMIM5Q71RC9 77 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 NBPF5PQ86XG9 351 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms