RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SYPP08247 313 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 MCM4P33991 863 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 TRIM26Q12899 539 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 SLC14A2Q15849 920 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 ADGRF1Q5T601 910 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 NLRC3Q7RTR2 1065 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 NLRX1Q86UT6 975 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 MAP6Q96JE9 813 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 SGPP1Q9BX95 441 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 PRDM14Q9GZV8 571 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 ANTXR1Q9H6X2 564 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 HMGXB3Q12766 1538 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 CLSPNQ9HAW4 1339 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 WDR62O43379 1518 aa6.73□□□□□ -1.33
PDLIM5-211ENST00000508531 RAD51AP2Q09MP3 1159 aa6.73□□□□□ -1.33
PDLIM5-211ENST00000508531 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
PDLIM5-211ENST00000508531 BBS9Q3SYG4 887 aa6.73□□□□□ -1.33
PDLIM5-211ENST00000508531 ZNF326Q5BKZ1 582 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-211ENST00000508531 CEP128Q6ZU80 1094 aa6.73□□□□□ -1.33
PDLIM5-211ENST00000508531 LINC00116Q8NCU8 138 aa6.73□□□□□ -1.33
PDLIM5-211ENST00000508531 CADPSQ9ULU8 1353 aa6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 TEX51A0A1B0GUA7 166 aa6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 OR14I1A6ND48 311 aa6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 MEIS1O00470 390 aa6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 SIGLEC6O43699 453 aa6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 NRDCO43847 1150 aa6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 KIR2DL1P43626 348 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 KIR2DL2P43627 348 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 LILRA6Q6PI73 481 aa6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 NKD1Q969G9 470 aa6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 HHIPL1Q96JK4 782 aa6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 GCM1Q9NP62 436 aa6.72□□□□□ -1.33
PDLIM5-211ENST00000508531 INHBBP09529 407 aa6.71□□□□□ -1.34
PDLIM5-211ENST00000508531 NME1P15531 152 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-211ENST00000508531 ZNF165P49910 485 aa6.71□□□□□ -1.34
PDLIM5-211ENST00000508531 TTLL10Q6ZVT0 673 aa6.71□□□□□ -1.34
PDLIM5-211ENST00000508531 TMEM192Q8IY95 271 aa6.71□□□□□ -1.34
PDLIM5-211ENST00000508531 REXO1Q8N1G1 1221 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-211ENST00000508531 SLC6A18Q96N87 628 aa6.71□□□□□ -1.34
PDLIM5-211ENST00000508531 MKRN2Q9H000 416 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-211ENST00000508531 CHST7Q9NS84 486 aa6.71□□□□□ -1.34
PDLIM5-211ENST00000508531 CNOT6Q9ULM6 557 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-211ENST00000508531 ARAP1Q96P48 1450 aa6.71□□□□□ -1.34
PDLIM5-211ENST00000508531 SDHBP21912 280 aa6.7□□□□□ -1.34
PDLIM5-211ENST00000508531 CCNFP41002 786 aa6.7□□□□□ -1.34
PDLIM5-211ENST00000508531 PLCD4Q9BRC7 762 aa6.7□□□□□ -1.34
PDLIM5-211ENST00000508531 NT5C1AQ9BXI3 368 aa6.7□□□□□ -1.34
PDLIM5-211ENST00000508531 GFOD1Q9NXC2 390 aa6.7□□□□□ -1.34
PDLIM5-211ENST00000508531 FBXL21Q9UKT6 434 aa6.7□□□□□ -1.34
PDLIM5-211ENST00000508531 FAM86C2PA6NEL3 165 aa6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 MEIS3P2A8K0S8 358 aa6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 TNFRSF10CO14798 259 aa6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 RTP1P59025 263 aa6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 SRSF3P84103 164 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 LRRFIP1Q32MZ4 808 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 SLITRK4Q8IW52 837 aa6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 TMEM87AQ8NBN3 555 aa6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 EAF1Q96JC9 268 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 FCRL2Q96LA5 508 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 CRTAC1Q9NQ79 661 aa6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 KCTD3Q9Y597 815 aa6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 PCDHB12Q9Y5F1 795 aa6.69□□□□□ -1.34
PDLIM5-211ENST00000508531 SSPNQ14714 243 aa6.68□□□□□ -1.34
PDLIM5-211ENST00000508531 KIR3DS1Q14943 382 aa6.68□□□□□ -1.34
PDLIM5-211ENST00000508531 KIAA0825Q8IV33 1275 aa6.68□□□□□ -1.34
PDLIM5-211ENST00000508531 SLC9A7Q96T83 725 aa6.68□□□□□ -1.34
PDLIM5-211ENST00000508531 SPON2Q9BUD6 331 aa6.68□□□□□ -1.34
PDLIM5-211ENST00000508531 BCL11AQ9H165 835 aa6.68□□□□□ -1.34
PDLIM5-211ENST00000508531 MBD1Q9UIS9 605 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-211ENST00000508531 GPR55Q9Y2T6 319 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-211ENST00000508531 SMARCA4P51532 1647 aa6.68□□□□□ -1.34
PDLIM5-211ENST00000508531 FADS2P1A8MWK0 482 aa6.67□□□□□ -1.34
PDLIM5-211ENST00000508531 PNLIPP16233 465 aa6.67□□□□□ -1.34
PDLIM5-211ENST00000508531 CTSKP43235 329 aa6.67□□□□□ -1.34
PDLIM5-211ENST00000508531 HSF5Q4G112 596 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-211ENST00000508531 ZNF385BQ569K4 471 aa6.67□□□□□ -1.34
PDLIM5-211ENST00000508531 CDADC1Q9BWV3 514 aa6.67□□□□□ -1.34
PDLIM5-211ENST00000508531 SIRT5Q9NXA8 310 aa6.67□□□□□ -1.34
PDLIM5-211ENST00000508531 TNFRSF10DQ9UBN6 386 aa6.67□□□□□ -1.34
PDLIM5-211ENST00000508531 RAPGEFL1Q9UHV5 662 aa6.67□□□□□ -1.34
PDLIM5-211ENST00000508531 CEP164Q9UPV0 1460 aa6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 ADAMTS20P59510 1910 aa6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 PI3P19957 117 aa6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 VIPR1P32241 457 aa6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 EPHB3P54753 998 aa6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 AUHQ13825 339 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 LDLRAD1Q5T700 205 aa6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 GALNT18Q6P9A2 607 aa6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 CRTC3Q6UUV7 619 aa6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 AP5S1Q9NUS5 200 aa6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 ERVK13-1Q9NX77 482 aa6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 TAF6LQ9Y6J9 622 aa6.66□□□□□ -1.34
PDLIM5-211ENST00000508531 C9IYK1 514 aa6.65□□□□□ -1.34
PDLIM5-211ENST00000508531 HRKO00198 91 aa6.65□□□□□ -1.34
PDLIM5-211ENST00000508531 RFXAPO00287 272 aa6.65□□□□□ -1.34
PDLIM5-211ENST00000508531 ZNF205O95201 554 aa6.65□□□□□ -1.34
PDLIM5-211ENST00000508531 ACRP10323 421 aa6.65□□□□□ -1.34
PDLIM5-211ENST00000508531 BMP7P18075 431 aa6.65□□□□□ -1.34
PDLIM5-211ENST00000508531 HOXA5P20719 270 aa6.65□□□□□ -1.34
PDLIM5-211ENST00000508531 BMP8BP34820 402 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms