RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 FLOT1O75955 427 aa20.3■□□□□ 0.84
TRIM60-203ENST00000508504 POTEEQ6S8J3 1075 aa20.3■□□□□ 0.84
TRIM60-203ENST00000508504 FASTKD5Q7L8L6 764 aaKnown RBP20.3■□□□□ 0.84
TRIM60-203ENST00000508504 ADGRF4Q8IZF3 695 aa20.3■□□□□ 0.84
TRIM60-203ENST00000508504 NSUN7Q8NE18 718 aaKnown RBP20.3■□□□□ 0.84
TRIM60-203ENST00000508504 KIFC2Q96AC6 838 aa20.3■□□□□ 0.84
TRIM60-203ENST00000508504 CNTNAP5Q8WYK1 1306 aa20.3■□□□□ 0.84
TRIM60-203ENST00000508504 CCDC196A0A1B0GTZ2 297 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 IGF2BP3O00425 579 aaKnown RBP eCLIP20.29■□□□□ 0.84
TRIM60-203ENST00000508504 CPLX1O14810 134 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 PEX10O60683 326 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 BTNL9Q6UXG8 535 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 PRR12Q9ULL5 1215 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 TESPA1A2RU30 521 aaPredicted RBP20.29■□□□□ 0.84
TRIM60-203ENST00000508504 USP17L15C9J2P7 530 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 USP17L13C9JLJ4 530 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 USP17L11C9JVI0 530 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 USP17L18D6R9N7 530 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 USP17L22D6RA61 530 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 USP17L17D6RBQ6 530 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 USP17L19D6RCP7 530 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 USP17L20D6RJB6 530 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 IFNAR1P17181 557 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 HOXA7P31268 230 aaPredicted RBP20.29■□□□□ 0.84
TRIM60-203ENST00000508504 VEGFBP49765 207 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 KIF23Q02241 960 aaPredicted RBP20.29■□□□□ 0.84
TRIM60-203ENST00000508504 USP17L24Q0WX57 530 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 PPP2R5BQ15173 497 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 DDX11Q96FC9 970 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 ASCC2Q9H1I8 757 aaPredicted RBP20.29■□□□□ 0.84
TRIM60-203ENST00000508504 JMJD4Q9H9V9 463 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 FEM1BQ9UK73 627 aa20.29■□□□□ 0.84
TRIM60-203ENST00000508504 PDHXO00330 501 aa20.28■□□□□ 0.84
TRIM60-203ENST00000508504 CYP2C8P10632 490 aa20.28■□□□□ 0.84
TRIM60-203ENST00000508504 FDPSP14324 419 aaKnown RBP20.28■□□□□ 0.84
TRIM60-203ENST00000508504 TAL1P17542 331 aaPredicted RBP20.28■□□□□ 0.84
TRIM60-203ENST00000508504 SYDE2Q5VT97 1194 aa20.28■□□□□ 0.84
TRIM60-203ENST00000508504 ATG4CQ96DT6 458 aa20.28■□□□□ 0.84
TRIM60-203ENST00000508504 SLF1Q9BQI6 1058 aa20.28■□□□□ 0.84
TRIM60-203ENST00000508504 SLC26A6Q9BXS9 759 aa20.28■□□□□ 0.84
TRIM60-203ENST00000508504 RIOX1Q9H6W3 641 aa20.28■□□□□ 0.84
TRIM60-203ENST00000508504 V9GY48 417 aaPredicted RBP20.28■□□□□ 0.84
TRIM60-203ENST00000508504 SMCHD1A6NHR9 2005 aa20.28■□□□□ 0.84
TRIM60-203ENST00000508504 PTPDC1A2A3K4 754 aa20.27■□□□□ 0.84
TRIM60-203ENST00000508504 MANSC4A6NHS7 340 aaPredicted RBP20.27■□□□□ 0.84
TRIM60-203ENST00000508504 DHX16O60231 1041 aaKnown RBP20.27■□□□□ 0.84
TRIM60-203ENST00000508504 HSPA6P17066 643 aa20.27■□□□□ 0.84
TRIM60-203ENST00000508504 GNAQP50148 359 aa20.27■□□□□ 0.84
TRIM60-203ENST00000508504 HOMER1Q86YM7 354 aa20.27■□□□□ 0.84
TRIM60-203ENST00000508504 PIGSQ96S52 555 aa20.27■□□□□ 0.84
TRIM60-203ENST00000508504 P2RX7Q99572 595 aaKnown RBP20.27■□□□□ 0.84
TRIM60-203ENST00000508504 SPZ1Q9BXG8 430 aa20.27■□□□□ 0.84
TRIM60-203ENST00000508504 PPP1R9AQ9ULJ8 1098 aa20.27■□□□□ 0.84
TRIM60-203ENST00000508504 SPDYE16A6NNV3 312 aaPredicted RBP20.26■□□□□ 0.83
TRIM60-203ENST00000508504 PLA2G6O60733 806 aa20.26■□□□□ 0.83
TRIM60-203ENST00000508504 BECN1Q14457 450 aa20.26■□□□□ 0.83
TRIM60-203ENST00000508504 COG2Q14746 738 aa20.26■□□□□ 0.83
TRIM60-203ENST00000508504 PRPF38AQ8NAV1 312 aaKnown RBP20.26■□□□□ 0.83
TRIM60-203ENST00000508504 CHURC1Q8WUH1 139 aa20.26■□□□□ 0.83
TRIM60-203ENST00000508504 AIFM3Q96NN9 605 aa20.26■□□□□ 0.83
TRIM60-203ENST00000508504 WDR33Q9C0J8 1336 aaKnown RBP20.26■□□□□ 0.83
TRIM60-203ENST00000508504 PPP1R11O60927 126 aaPredicted RBP20.26■□□□□ 0.83
TRIM60-203ENST00000508504 NOGQ13253 232 aa20.26■□□□□ 0.83
TRIM60-203ENST00000508504 ANKRD23Q86SG2 305 aa20.26■□□□□ 0.83
TRIM60-203ENST00000508504 SMARCC2Q8TAQ2 1214 aa20.26■□□□□ 0.83
TRIM60-203ENST00000508504 LZTS2Q9BRK4 669 aa20.26■□□□□ 0.83
TRIM60-203ENST00000508504 COL11A1P12107 1806 aaPredicted RBP20.25■□□□□ 0.83
TRIM60-203ENST00000508504 FMNL1O95466 1100 aaPredicted RBP20.25■□□□□ 0.83
TRIM60-203ENST00000508504 DSG3P32926 999 aa20.25■□□□□ 0.83
TRIM60-203ENST00000508504 IRX3P78415 501 aaPredicted RBP20.25■□□□□ 0.83
TRIM60-203ENST00000508504 PKN1Q16512 942 aa20.25■□□□□ 0.83
TRIM60-203ENST00000508504 FAM160B2Q86V87 743 aa20.25■□□□□ 0.83
TRIM60-203ENST00000508504 IFNL1Q8IU54 200 aa20.25■□□□□ 0.83
TRIM60-203ENST00000508504 MTMR8Q96EF0 704 aa20.25■□□□□ 0.83
TRIM60-203ENST00000508504 MYH6P13533 1939 aa20.24■□□□□ 0.83
TRIM60-203ENST00000508504 VWA5AO00534 786 aa20.24■□□□□ 0.83
TRIM60-203ENST00000508504 CDC37Q16543 378 aaPredicted RBP20.24■□□□□ 0.83
TRIM60-203ENST00000508504 SHISA4Q96DD7 197 aa20.24■□□□□ 0.83
TRIM60-203ENST00000508504 LLPHQ9BRT6 129 aaKnown RBP20.24■□□□□ 0.83
TRIM60-203ENST00000508504 GJB4Q9NTQ9 266 aa20.24■□□□□ 0.83
TRIM60-203ENST00000508504 ORC3Q9UBD5 711 aaPredicted RBP20.24■□□□□ 0.83
TRIM60-203ENST00000508504 ADAMTS5Q9UNA0 930 aa20.24■□□□□ 0.83
TRIM60-203ENST00000508504 SMARCA1P28370 1054 aa20.23■□□□□ 0.83
TRIM60-203ENST00000508504 TM4SF4P48230 202 aa20.23■□□□□ 0.83
TRIM60-203ENST00000508504 HERVK_113P62684 666 aa20.23■□□□□ 0.83
TRIM60-203ENST00000508504 SSRP1Q08945 709 aaKnown RBP20.23■□□□□ 0.83
TRIM60-203ENST00000508504 QRICH1Q2TAL8 776 aa20.23■□□□□ 0.83
TRIM60-203ENST00000508504 CCDC174Q6PII3 467 aa20.23■□□□□ 0.83
TRIM60-203ENST00000508504 CPLX2Q6PUV4 134 aaKnown RBP20.23■□□□□ 0.83
TRIM60-203ENST00000508504 RNF26Q9BY78 433 aaPredicted RBP20.23■□□□□ 0.83
TRIM60-203ENST00000508504 RANBP17Q9H2T7 1088 aaKnown RBP20.23■□□□□ 0.83
TRIM60-203ENST00000508504 SLC38A10Q9HBR0 1119 aa20.23■□□□□ 0.83
TRIM60-203ENST00000508504 ZNF536O15090 1300 aa20.23■□□□□ 0.83
TRIM60-203ENST00000508504 PRPF3O43395 683 aaKnown RBP20.22■□□□□ 0.83
TRIM60-203ENST00000508504 CDKL5O76039 1030 aa20.22■□□□□ 0.83
TRIM60-203ENST00000508504 GJB2P29033 226 aa20.22■□□□□ 0.83
TRIM60-203ENST00000508504 REPS2Q8NFH8 660 aa20.22■□□□□ 0.83
TRIM60-203ENST00000508504 GPKOWQ92917 476 aaPredicted RBP eCLIP20.22■□□□□ 0.83
TRIM60-203ENST00000508504 INTS4Q96HW7 963 aaKnown RBP20.22■□□□□ 0.83
TRIM60-203ENST00000508504 TXNRD2Q9NNW7 524 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms