RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 SPZ1Q9BXG8 430 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 MAD2L2Q9UI95 211 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 K7ELQ4 463 aaPredicted RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 PARP1P09874 1014 aaKnown RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 BMP3P12645 472 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 VCAM1P19320 739 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 SLC1A4P43007 532 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 METAP2P50579 478 aaKnown RBP eCLIP10.07□□□□□ -0.8
USP46-207ENST00000508499 ZNF157P51786 506 aaPredicted RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 NOGQ13253 232 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 NTRK3Q16288 839 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 ME3Q16798 604 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 SLFN13Q68D06 897 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 FAM160B2Q86V87 743 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 TEX2Q8IWB9 1127 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 FAM177A1Q8N128 213 aaPredicted RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 LRRC47Q8N1G4 583 aaKnown RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 CTCFLQ8NI51 663 aaPredicted RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 MTMR8Q96EF0 704 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 INTS4Q96HW7 963 aaKnown RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 TMX3Q96JJ7 454 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 RIOX1Q9H6W3 641 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 RBM27Q9P2N5 1060 aaKnown RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 FEM1BQ9UK73 627 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 ADAMTS5Q9UNA0 930 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 AGTPBP1Q9UPW5 1226 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 RBBP6Q7Z6E9 1792 aaKnown RBP10.06□□□□□ -0.8
USP46-207ENST00000508499 TRIM75PA6NK02 468 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 GOLGA8BA8MQT2 603 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 IFNAR1P17181 557 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 TM4SF4P48230 202 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 HMGCS2P54868 508 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 FUT2Q10981 343 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 PABPC4Q13310 644 aaKnown RBP eCLIP10.06□□□□□ -0.8
USP46-207ENST00000508499 DEFB115Q30KQ5 88 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 KIAA1755Q5JYT7 1200 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 CATSPERGQ6ZRH7 1159 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 ANKRD23Q86SG2 305 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 CCDC84Q86UT8 332 aaPredicted RBP10.06□□□□□ -0.8
USP46-207ENST00000508499 CHURC1Q8WUH1 139 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 MAF1Q9H063 256 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 TSHZ2Q9NRE2 1034 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 TMOD4Q9NZQ9 345 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 PNMA2Q9UL42 364 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 ABT1Q9ULW3 272 aaKnown RBP10.06□□□□□ -0.8
USP46-207ENST00000508499 STK36Q9NRP7 1315 aa10.06□□□□□ -0.8
USP46-207ENST00000508499 GOLGA8AA7E2F4 631 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 USP17L15C9J2P7 530 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 USP17L13C9JLJ4 530 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 USP17L11C9JVI0 530 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 USP17L18D6R9N7 530 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 USP17L22D6RA61 530 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 USP17L17D6RBQ6 530 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 USP17L19D6RCP7 530 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 USP17L20D6RJB6 530 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 ATP2A1O14983 1001 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 CDKL5O76039 1030 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 MAP2K2P36507 400 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 STAT2P52630 851 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 C1QTNF8P60827 252 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 ATP2B2Q01814 1243 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 USP17L24Q0WX57 530 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 SCRN1Q12765 414 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 SREBF2Q12772 1141 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 RTN1Q16799 776 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 GPAT2Q6NUI2 795 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 TMTC3Q6ZXV5 915 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 MICU3Q86XE3 530 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 PRPF38AQ8NAV1 312 aaKnown RBP10.05□□□□□ -0.8
USP46-207ENST00000508499 GTF3C2Q8WUA4 911 aaPredicted RBP10.05□□□□□ -0.8
USP46-207ENST00000508499 RNF25Q96BH1 459 aaPredicted RBP10.05□□□□□ -0.8
USP46-207ENST00000508499 CFHR5Q9BXR6 569 aa10.05□□□□□ -0.8
USP46-207ENST00000508499 RNF26Q9BY78 433 aaPredicted RBP10.05□□□□□ -0.8
USP46-207ENST00000508499 SLKQ9H2G2 1235 aaPredicted RBP10.05□□□□□ -0.8
USP46-207ENST00000508499 FAM205CA6NFA0 338 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 KLRF2D3W0D1 207 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 hCG_1984214I3L0E3 225 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 LARGE1O95461 756 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 PDIA4P13667 645 aaKnown RBP10.04□□□□□ -0.8
USP46-207ENST00000508499 HSPA6P17066 643 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 CDC27P30260 824 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 OAZ1P54368 228 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 ST3GAL1Q11201 340 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 BECN1Q14457 450 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 COG2Q14746 738 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 CPLX2Q6PUV4 134 aaKnown RBP10.04□□□□□ -0.8
USP46-207ENST00000508499 NBPF11Q86T75 865 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 HSCBQ8IWL3 235 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 ZNF713Q8N859 430 aaPredicted RBP10.04□□□□□ -0.8
USP46-207ENST00000508499 MB21D1Q8N884 522 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 SMARCC2Q8TAQ2 1214 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 RPAP3Q9H6T3 665 aaPredicted RBP10.04□□□□□ -0.8
USP46-207ENST00000508499 HOXC10Q9NYD6 342 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 PNMA3Q9UL41 463 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 PCDHB8Q9UN66 801 aa10.04□□□□□ -0.8
USP46-207ENST00000508499 CNTNAP5Q8WYK1 1306 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 CCL15-CCL14A0A0B4J2E2 113 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 PRPF3O43395 683 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms