RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PCGF6Q9BYE7 350 aa6.49□□□□□ -1.37
NUP54-206ENST00000508465 DCP1AQ9NPI6 582 aaPredicted RBP6.49□□□□□ -1.37
NUP54-206ENST00000508465 SETD1AO15047 1707 aaKnown RBP6.48□□□□□ -1.37
NUP54-206ENST00000508465 JCADQ9P266 1359 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 TCAF2A6NFQ2 919 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 H3BS24 57 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 SLITRK5O94991 958 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 KRT1P04264 644 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 GSTT1P30711 240 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 CIAPIN1Q6FI81 312 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 ZNF746Q6NUN9 644 aaPredicted RBP6.48□□□□□ -1.37
NUP54-206ENST00000508465 TPTE2Q6XPS3 522 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 THAP5Q7Z6K1 395 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 MFSD2AQ8NA29 543 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 ABHD4Q8TB40 342 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 PMFBP1Q8TBY8 1022 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 LRRC59Q96AG4 307 aaKnown RBP6.48□□□□□ -1.37
NUP54-206ENST00000508465 ALPK1Q96QP1 1244 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 EPB41L4BQ9H329 900 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 C19orf73Q9NVV2 129 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 CYP8B1Q9UNU6 501 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 ASXL1Q8IXJ9 1541 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 PTCH1Q13635 1447 aa6.48□□□□□ -1.37
NUP54-206ENST00000508465 MED1Q15648 1581 aaPredicted RBP6.48□□□□□ -1.37
NUP54-206ENST00000508465 PHLPP1O60346 1717 aa6.47□□□□□ -1.37
NUP54-206ENST00000508465 IFT172Q9UG01 1749 aa6.47□□□□□ -1.37
NUP54-206ENST00000508465 NRXN1Q9ULB1 1477 aa6.47□□□□□ -1.37
NUP54-206ENST00000508465 PLCB3Q01970 1234 aa6.47□□□□□ -1.37
NUP54-206ENST00000508465 KCNA10Q16322 511 aa6.47□□□□□ -1.37
NUP54-206ENST00000508465 NBPF8Q3BBV2 869 aa6.47□□□□□ -1.37
NUP54-206ENST00000508465 ATG14Q6ZNE5 492 aa6.47□□□□□ -1.37
NUP54-206ENST00000508465 KRT28Q7Z3Y7 464 aa6.47□□□□□ -1.37
NUP54-206ENST00000508465 SRCIN1Q9C0H9 1055 aa6.47□□□□□ -1.37
NUP54-206ENST00000508465 PPM1HQ9ULR3 514 aa6.47□□□□□ -1.37
NUP54-206ENST00000508465 MYOM2P54296 1465 aa6.47□□□□□ -1.37
NUP54-206ENST00000508465 PRR33A8MZF0 331 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 ENC1O14682 589 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 CYP7A1P22680 504 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 DCCP43146 1447 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 FGD1P98174 961 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 HDXQ7Z353 690 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 TTC6Q86TZ1 520 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 NALCNQ8IZF0 1738 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 C3orf58Q8NDZ4 430 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 KCNN1Q92952 543 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 MIPEPQ99797 713 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 CDK19Q9BWU1 502 aa6.46□□□□□ -1.38
NUP54-206ENST00000508465 TECPR2O15040 1411 aa6.45□□□□□ -1.38
NUP54-206ENST00000508465 PNMA6FA0A0J9YX94 578 aa6.45□□□□□ -1.38
NUP54-206ENST00000508465 PRAMEF27A3QJZ7 478 aa6.45□□□□□ -1.38
NUP54-206ENST00000508465 TMC7Q7Z402 723 aa6.45□□□□□ -1.38
NUP54-206ENST00000508465 UBE2FQ969M7 185 aa6.45□□□□□ -1.38
NUP54-206ENST00000508465 COX4I2Q96KJ9 171 aa6.45□□□□□ -1.38
NUP54-206ENST00000508465 C8orf37Q96NL8 207 aa6.45□□□□□ -1.38
NUP54-206ENST00000508465 SLAMF8Q9P0V8 285 aa6.45□□□□□ -1.38
NUP54-206ENST00000508465 ST14Q9Y5Y6 855 aa6.45□□□□□ -1.38
NUP54-206ENST00000508465 CAPN6Q9Y6Q1 641 aa6.45□□□□□ -1.38
NUP54-206ENST00000508465 PRR36Q9H6K5 1346 aa6.45□□□□□ -1.38
NUP54-206ENST00000508465 COL16A1Q07092 1604 aaPredicted RBP6.44□□□□□ -1.38
NUP54-206ENST00000508465 PAGE1O75459 146 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 CBX7O95931 251 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 MED14OSP0DP75 135 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 GLDCP23378 1020 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 LCE5AQ5TCM9 118 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 WNT10AQ9GZT5 417 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 CD320Q9NPF0 282 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 ZSWIM5Q9P217 1185 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 AFF2P51816 1311 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 SPATA31A6Q5VVP1 1343 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 NPHP3Q7Z494 1330 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 ADGRB1O14514 1584 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 PNPLA6Q8IY17 1366 aa6.44□□□□□ -1.38
NUP54-206ENST00000508465 LRP6O75581 1613 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 PRAG1Q86YV5 1406 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 ETV2O00321 342 aaPredicted RBP6.43□□□□□ -1.38
NUP54-206ENST00000508465 INHBBP09529 407 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 CAP2P40123 477 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 KIR3DL1P43629 444 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 CTSWP56202 376 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 ETF1P62495 437 aaKnown RBP6.43□□□□□ -1.38
NUP54-206ENST00000508465 PDE4CQ08493 712 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 SLBPQ14493 270 aaKnown RBP eCLIP6.43□□□□□ -1.38
NUP54-206ENST00000508465 INPP5AQ14642 412 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 ENOX2Q16206 610 aaKnown RBP6.43□□□□□ -1.38
NUP54-206ENST00000508465 LETMD1Q6P1Q0 360 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 HID1Q8IV36 788 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 NGDNQ8NEJ9 315 aaKnown RBP6.43□□□□□ -1.38
NUP54-206ENST00000508465 MYLIPQ8WY64 445 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 DCTN4Q9UJW0 460 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 SMG5Q9UPR3 1016 aaKnown RBP6.43□□□□□ -1.38
NUP54-206ENST00000508465 CNTNAP4Q9C0A0 1308 aa6.43□□□□□ -1.38
NUP54-206ENST00000508465 AHDC1Q5TGY3 1603 aaPredicted RBP6.43□□□□□ -1.38
NUP54-206ENST00000508465 GIPC1O14908 333 aa6.42□□□□□ -1.38
NUP54-206ENST00000508465 NUAK1O60285 661 aa6.42□□□□□ -1.38
NUP54-206ENST00000508465 LRFN4Q6PJG9 635 aa6.42□□□□□ -1.38
NUP54-206ENST00000508465 TMPRSS7Q7RTY8 843 aa6.42□□□□□ -1.38
NUP54-206ENST00000508465 SNCAIPQ9Y6H5 919 aa6.42□□□□□ -1.38
NUP54-206ENST00000508465 SPATA31A3Q5VYP0 1347 aa6.42□□□□□ -1.38
NUP54-206ENST00000508465 FBXO24O75426 580 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms