RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 GOLGA6L9A6NEM1 432 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 N4BP3O15049 544 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 RPN1P04843 607 aaKnown RBP12.35□□□□□ -0.43
LIN54-207ENST00000508171 RFC4P35249 363 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 LONP1P36776 959 aaKnown RBP12.35□□□□□ -0.43
LIN54-207ENST00000508171 VPS72Q15906 364 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 FILIP1LQ4L180 1135 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 NAALADL2Q58DX5 795 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 ZNF658Q5TYW1 1059 aaPredicted RBP12.35□□□□□ -0.43
LIN54-207ENST00000508171 NELFBQ8WX92 580 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 SH3GLB2Q9NR46 395 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 FAM53CQ9NYF3 392 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 ADGRG1Q9Y653 693 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 LRRC10BA6NIK2 292 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 ABL1P00519 1130 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 CCDC175P0C221 793 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 STAT6P42226 847 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 PAK1Q13153 545 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 GRAPQ13588 217 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 GRAPLQ8TC17 118 aaPredicted RBP12.34□□□□□ -0.43
LIN54-207ENST00000508171 SRRTQ9BXP5 876 aaKnown RBP12.34□□□□□ -0.43
LIN54-207ENST00000508171 TAB2Q9NYJ8 693 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 RWDD2AQ9UIY3 292 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 ZHX1Q9UKY1 873 aaPredicted RBP12.34□□□□□ -0.43
LIN54-207ENST00000508171 GOLGB1Q14789 3259 aaKnown RBP12.34□□□□□ -0.43
LIN54-207ENST00000508171 TRIM49BA6NDI0 452 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 EFCAB8A8MWE9 144 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 MFAP3LO75121 409 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 BAG3O95817 575 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 RASA1P20936 1047 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 DTHD1Q6ZMT9 781 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 KRT222Q8N1A0 295 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 ST7Q9NRC1 585 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 LEMD3Q9Y2U8 911 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 LTBP4Q8N2S1 1624 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 CDK5RAP2Q96SN8 1893 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 STXBP3O00186 592 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 TCP11X2Q5H9J9 407 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 UTP14CQ5TAP6 766 aaKnown RBP12.34□□□□□ -0.43
LIN54-207ENST00000508171 LRRC15Q8TF66 581 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 CCDC12Q8WUD4 166 aaPredicted RBP12.34□□□□□ -0.43
LIN54-207ENST00000508171 GTPBP4Q9BZE4 634 aaKnown RBP12.34□□□□□ -0.43
LIN54-207ENST00000508171 DISC1Q9NRI5 854 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 LIMA1Q9UHB6 759 aaKnown RBP12.34□□□□□ -0.43
LIN54-207ENST00000508171 MRFAP1Q9Y605 127 aa12.34□□□□□ -0.43
LIN54-207ENST00000508171 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
LIN54-207ENST00000508171 KCNJ18B7U540 433 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 KLRF2D3W0D1 207 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 COPB1P53618 953 aaKnown RBP12.33□□□□□ -0.44
LIN54-207ENST00000508171 PMS1P54277 932 aaKnown RBP12.33□□□□□ -0.44
LIN54-207ENST00000508171 PPP4CP60510 307 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 KCNJ12Q14500 433 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 TRAPPC3LQ5T215 181 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 IRF2BP1Q8IU81 584 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 RASSF8Q8NHQ8 419 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 RTFDC1Q9BY42 306 aaPredicted RBP12.33□□□□□ -0.44
LIN54-207ENST00000508171 BARHL2Q9NY43 387 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 FHOD1Q9Y613 1164 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 TXLNAP40222 546 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 GNAQP50148 359 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 GPSM2P81274 684 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 TMED8Q6PL24 325 aaPredicted RBP12.33□□□□□ -0.44
LIN54-207ENST00000508171 PYM1Q9BRP8 204 aaKnown RBP12.33□□□□□ -0.44
LIN54-207ENST00000508171 TCP11L1Q9NUJ3 509 aa12.33□□□□□ -0.44
LIN54-207ENST00000508171 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 ROBO3Q96MS0 1386 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 BTDP43251 543 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 GSTO1P78417 241 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 PPP2R3AQ06190 1150 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 USP17L2Q6R6M4 530 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 FAM196AQ6ZSG2 479 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 ZNF804AQ7Z570 1209 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 AMOTL1Q8IY63 956 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 CNBD1Q8NA66 436 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 ACRBPQ8NEB7 543 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 EEF2KMTQ96G04 330 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 NAA15Q9BXJ9 866 aaKnown RBP12.32□□□□□ -0.44
LIN54-207ENST00000508171 VAT1LQ9HCJ6 419 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 NAV1Q8NEY1 1877 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 UBA7P41226 1012 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 CDK8P49336 464 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 ERVK-24P63145 666 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 CNGA4Q8IV77 575 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 NUP88Q99567 741 aaPredicted RBP12.32□□□□□ -0.44
LIN54-207ENST00000508171 ZSWIM4Q9H7M6 989 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 CD209Q9NNX6 404 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 RMND1Q9NWS8 449 aa12.32□□□□□ -0.44
LIN54-207ENST00000508171 MYH1P12882 1939 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 KLRC4O43908 158 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 SEC31AO94979 1220 aaKnown RBP12.31□□□□□ -0.44
LIN54-207ENST00000508171 ADSSL1Q8N142 457 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 EYA3Q99504 573 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 ITIH6Q6UXX5 1313 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 UFL1O94874 794 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 LDHCP07864 332 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 UBXN1Q04323 297 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 BMS1Q14692 1282 aaKnown RBP12.31□□□□□ -0.44
LIN54-207ENST00000508171 TEX35Q5T0J7 233 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 PRR5LQ6MZQ0 368 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 DAGLBQ8NCG7 672 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms