RNA–Protein interactions for RNA: ENST00000508100.1

ITGA3-211, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-211ENST00000508100 CLIP2Q9UDT6 1046 aa19.55■□□□□ 0.72
ITGA3-211ENST00000508100 LTBP2Q14767 1821 aa19.54■□□□□ 0.72
ITGA3-211ENST00000508100 TRIM43BA6NCK2 446 aa19.54■□□□□ 0.72
ITGA3-211ENST00000508100 NDUFB10O96000 172 aa19.54■□□□□ 0.72
ITGA3-211ENST00000508100 ZNF865P0CJ78 1059 aaPredicted RBP19.54■□□□□ 0.72
ITGA3-211ENST00000508100 LRRFIP1Q32MZ4 808 aaKnown RBP19.54■□□□□ 0.72
ITGA3-211ENST00000508100 C9orf50Q5SZB4 431 aa19.54■□□□□ 0.72
ITGA3-211ENST00000508100 CPXCR1Q8N123 301 aa19.54■□□□□ 0.72
ITGA3-211ENST00000508100 TRIM43Q96BQ3 446 aaPredicted RBP19.54■□□□□ 0.72
ITGA3-211ENST00000508100 GUCD1Q96NT3 240 aa19.54■□□□□ 0.72
ITGA3-211ENST00000508100 PLXNA1Q9UIW2 1896 aa19.54■□□□□ 0.72
ITGA3-211ENST00000508100 GPAA1O43292 621 aa19.53■□□□□ 0.72
ITGA3-211ENST00000508100 CLTBP09497 229 aa19.53■□□□□ 0.72
ITGA3-211ENST00000508100 FAM184BQ9ULE4 1060 aa19.53■□□□□ 0.72
ITGA3-211ENST00000508100 A0A1W2PQ45 241 aaPredicted RBP19.52■□□□□ 0.72
ITGA3-211ENST00000508100 A0A1W2PQY0 241 aa19.52■□□□□ 0.72
ITGA3-211ENST00000508100 PQBP1O60828 265 aaKnown RBP19.52■□□□□ 0.72
ITGA3-211ENST00000508100 RAG1P15918 1043 aa19.52■□□□□ 0.72
ITGA3-211ENST00000508100 NUP133Q8WUM0 1156 aa19.52■□□□□ 0.72
ITGA3-211ENST00000508100 KIFC2Q96AC6 838 aa19.52■□□□□ 0.72
ITGA3-211ENST00000508100 TSEN34Q9BSV6 310 aaKnown RBP19.52■□□□□ 0.72
ITGA3-211ENST00000508100 DCTPP1Q9H773 170 aa19.52■□□□□ 0.72
ITGA3-211ENST00000508100 RIPK3Q9Y572 518 aa19.52■□□□□ 0.72
ITGA3-211ENST00000508100 ROBO3Q96MS0 1386 aa19.52■□□□□ 0.72
ITGA3-211ENST00000508100 SYNGAP1Q96PV0 1343 aa19.51■□□□□ 0.71
ITGA3-211ENST00000508100 ATP2A1O14983 1001 aa19.51■□□□□ 0.71
ITGA3-211ENST00000508100 PRDM1O75626 825 aa19.51■□□□□ 0.71
ITGA3-211ENST00000508100 TSHZ3Q63HK5 1081 aa19.51■□□□□ 0.71
ITGA3-211ENST00000508100 LENG1Q96BZ8 264 aaPredicted RBP19.51■□□□□ 0.71
ITGA3-211ENST00000508100 NACAP1Q9BZK3 213 aa19.51■□□□□ 0.71
ITGA3-211ENST00000508100 STARD7Q9NQZ5 370 aa19.51■□□□□ 0.71
ITGA3-211ENST00000508100 TMEM39AQ9NV64 488 aa19.51■□□□□ 0.71
ITGA3-211ENST00000508100 FEM1BQ9UK73 627 aa19.51■□□□□ 0.71
ITGA3-211ENST00000508100 ZHX1Q9UKY1 873 aaPredicted RBP19.51■□□□□ 0.71
ITGA3-211ENST00000508100 A0A0C4DFX4 3053 aa19.51■□□□□ 0.71
ITGA3-211ENST00000508100 DCDC2CA8MYV0 355 aa19.5■□□□□ 0.71
ITGA3-211ENST00000508100 PATL2C9JE40 543 aaKnown RBP19.5■□□□□ 0.71
ITGA3-211ENST00000508100 ADAMTS4O75173 837 aa19.5■□□□□ 0.71
ITGA3-211ENST00000508100 SNAI1O95863 264 aaPredicted RBP19.5■□□□□ 0.71
ITGA3-211ENST00000508100 SLC3A2P08195 630 aaKnown RBP19.5■□□□□ 0.71
ITGA3-211ENST00000508100 ACLYP53396 1101 aa19.5■□□□□ 0.71
ITGA3-211ENST00000508100 SMAD3P84022 425 aaKnown RBP19.5■□□□□ 0.71
ITGA3-211ENST00000508100 MAMDC4Q6UXC1 1216 aa19.5■□□□□ 0.71
ITGA3-211ENST00000508100 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.5■□□□□ 0.71
ITGA3-211ENST00000508100 ANKRD35Q8N283 1001 aa19.5■□□□□ 0.71
ITGA3-211ENST00000508100 MKL1Q969V6 931 aa19.5■□□□□ 0.71
ITGA3-211ENST00000508100 CEP95Q96GE4 821 aa19.5■□□□□ 0.71
ITGA3-211ENST00000508100 RAVER2Q9HCJ3 691 aaKnown RBP19.5■□□□□ 0.71
ITGA3-211ENST00000508100 EPB41L4AQ9HCS5 686 aaPredicted RBP19.5■□□□□ 0.71
ITGA3-211ENST00000508100 MTMR4Q9NYA4 1195 aa19.5■□□□□ 0.71
ITGA3-211ENST00000508100 FBXO40Q9UH90 709 aa19.5■□□□□ 0.71
ITGA3-211ENST00000508100 ISY1Q9ULR0 285 aaKnown RBP19.5■□□□□ 0.71
ITGA3-211ENST00000508100 SYNPO2Q9UMS6 1093 aa19.5■□□□□ 0.71
ITGA3-211ENST00000508100 GREB1LQ9C091 1923 aaPredicted RBP19.5■□□□□ 0.71
ITGA3-211ENST00000508100 DNAJC25-GNG10A0A024R161 153 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 IGKV6D-41A0A0C4DH26 115 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 MOXD2PA6NHM9 499 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 KIAA0355O15063 1070 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 DUSP11O75319 330 aaKnown RBP19.49■□□□□ 0.71
ITGA3-211ENST00000508100 TTLL1O95922 423 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 TSPY3P0CV98 308 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 TSPY8P0CW00 308 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 PDE4BQ07343 736 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 ZNF467Q7Z7K2 595 aaPredicted RBP19.49■□□□□ 0.71
ITGA3-211ENST00000508100 IFNL3Q8IZI9 196 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 RNPC3Q96LT9 517 aaKnown RBP19.49■□□□□ 0.71
ITGA3-211ENST00000508100 CDX2Q99626 313 aaPredicted RBP19.49■□□□□ 0.71
ITGA3-211ENST00000508100 SEMA6BQ9H3T3 888 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 SPC25Q9HBM1 224 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 SLC38A10Q9HBR0 1119 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 SYNRGQ9UMZ2 1314 aa19.49■□□□□ 0.71
ITGA3-211ENST00000508100 M0R2C6 588 aa19.48■□□□□ 0.71
ITGA3-211ENST00000508100 ERC2O15083 957 aa19.48■□□□□ 0.71
ITGA3-211ENST00000508100 ITGB8P26012 769 aa19.48■□□□□ 0.71
ITGA3-211ENST00000508100 ACVR2BQ13705 512 aa19.48■□□□□ 0.71
ITGA3-211ENST00000508100 KCNA10Q16322 511 aa19.48■□□□□ 0.71
ITGA3-211ENST00000508100 ANKRD33Q7Z3H0 272 aa19.48■□□□□ 0.71
ITGA3-211ENST00000508100 LRRC47Q8N1G4 583 aaKnown RBP19.48■□□□□ 0.71
ITGA3-211ENST00000508100 GMCL1P1Q8NEA9 526 aa19.48■□□□□ 0.71
ITGA3-211ENST00000508100 CHST13Q8NET6 341 aa19.48■□□□□ 0.71
ITGA3-211ENST00000508100 TOX2Q96NM4 488 aa19.48■□□□□ 0.71
ITGA3-211ENST00000508100 MYH4Q9Y623 1939 aa19.47■□□□□ 0.71
ITGA3-211ENST00000508100 FDX1P10109 184 aa19.47■□□□□ 0.71
ITGA3-211ENST00000508100 BMP3P12645 472 aa19.47■□□□□ 0.71
ITGA3-211ENST00000508100 OAZ1P54368 228 aa19.47■□□□□ 0.71
ITGA3-211ENST00000508100 FPGSQ05932 587 aa19.47■□□□□ 0.71
ITGA3-211ENST00000508100 SLFN13Q68D06 897 aa19.47■□□□□ 0.71
ITGA3-211ENST00000508100 PCSK9Q8NBP7 692 aaKnown RBP19.47■□□□□ 0.71
ITGA3-211ENST00000508100 KLHDC9Q8NEP7 349 aa19.47■□□□□ 0.71
ITGA3-211ENST00000508100 VTI1AQ96AJ9 217 aa19.47■□□□□ 0.71
ITGA3-211ENST00000508100 GLT1D1Q96MS3 346 aa19.47■□□□□ 0.71
ITGA3-211ENST00000508100 ABHD16BQ9H3Z7 469 aa19.47■□□□□ 0.71
ITGA3-211ENST00000508100 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.47■□□□□ 0.71
ITGA3-211ENST00000508100 C6orf222P0C671 652 aaPredicted RBP19.46■□□□□ 0.71
ITGA3-211ENST00000508100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.46■□□□□ 0.71
ITGA3-211ENST00000508100 NEDD1Q8NHV4 660 aa19.46■□□□□ 0.71
ITGA3-211ENST00000508100 FSD1Q9BTV5 496 aa19.46■□□□□ 0.71
ITGA3-211ENST00000508100 NAPBQ9H115 298 aa19.46■□□□□ 0.71
ITGA3-211ENST00000508100 TTC41PQ6P2S7 1318 aa19.46■□□□□ 0.71
ITGA3-211ENST00000508100 EPHB4P54760 987 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms