RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 FLT1P17948 1338 aa10.64□□□□□ -0.71
NEK1-203ENST00000507142 ALDH1A1P00352 501 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 AKR1B1P15121 316 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 KRT40Q6A162 431 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 CCDC65Q8IXS2 484 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 CDHR1Q96JP9 859 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 KIF4AO95239 1232 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 CTR9Q6PD62 1173 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 ERO1BQ86YB8 467 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 CEP95Q96GE4 821 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 AKT3Q9Y243 479 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 PPP2R3BQ9Y5P8 575 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 ZNF142P52746 1687 aaPredicted RBP10.63□□□□□ -0.71
NEK1-203ENST00000507142 KBTBD13C9JR72 458 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 ONECUT3O60422 494 aaPredicted RBP10.63□□□□□ -0.71
NEK1-203ENST00000507142 HOXA13P31271 388 aaPredicted RBP10.63□□□□□ -0.71
NEK1-203ENST00000507142 HSPA4P34932 840 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 NBPF12Q5TAG4 269 aaPredicted RBP10.63□□□□□ -0.71
NEK1-203ENST00000507142 CCDC181Q5TID7 509 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 RCSD1Q6JBY9 416 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 GLTPD2A6NH11 291 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 PLCD1P51178 756 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 CCDC173Q0VFZ6 552 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 FAM102BQ5T8I3 360 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 SCYL3Q8IZE3 742 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 DPF2Q92785 391 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 TTC14Q96N46 770 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 PDGFDQ9GZP0 370 aaPredicted RBP10.63□□□□□ -0.71
NEK1-203ENST00000507142 HOXA10P31260 410 aaPredicted RBP10.63□□□□□ -0.71
NEK1-203ENST00000507142 INF2Q27J81 1249 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 SIRT2Q8IXJ6 389 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 GPRC5AQ8NFJ5 357 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 FNBP1Q96RU3 617 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 LLPHQ9BRT6 129 aaKnown RBP10.63□□□□□ -0.71
NEK1-203ENST00000507142 ZNF577Q9BSK1 485 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 ANO10Q9NW15 660 aa10.63□□□□□ -0.71
NEK1-203ENST00000507142 NEMFO60524 1076 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 ZBTB8OSQ8IWT0 167 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 SYNCQ9H7C4 482 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 ACAD9Q9H845 621 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 ZSWIM5Q9P217 1185 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 DDX25Q9UHL0 483 aaKnown RBP10.62□□□□□ -0.71
NEK1-203ENST00000507142 STXBP2Q15833 593 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 MIS18BP1Q6P0N0 1132 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 FAM114A1Q8IWE2 563 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 GTF3C2Q8WUA4 911 aaPredicted RBP10.62□□□□□ -0.71
NEK1-203ENST00000507142 OPTNQ96CV9 577 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 CDCA5Q96FF9 252 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 GPRC5DQ9NZD1 345 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 DTNBO60941 627 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 POLGP54098 1239 aaPredicted RBP10.62□□□□□ -0.71
NEK1-203ENST00000507142 TXNRD3Q86VQ6 643 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 NUDT12Q9BQG2 462 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 BCL2L12Q9HB09 334 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 EXOC7Q9UPT5 735 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 MANSC4A6NHS7 340 aaPredicted RBP10.62□□□□□ -0.71
NEK1-203ENST00000507142 RAD51AP2Q09MP3 1159 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 PGBD1Q96JS3 809 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 ZMYM6O95789 1325 aa10.62□□□□□ -0.71
NEK1-203ENST00000507142 CYP21A2P08686 494 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 BIRC3Q13489 604 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 SEPT9Q9UHD8 586 aaPredicted RBP10.61□□□□□ -0.71
NEK1-203ENST00000507142 CTAGE5O15320 804 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 ERLIN2O94905 339 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 ANKRD13CQ8N6S4 541 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 IQUBQ8NA54 791 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 RMDN3Q96TC7 470 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 TMEM47Q9BQJ4 181 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 NEK8Q86SG6 692 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 VPS36Q86VN1 386 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 DGKHQ86XP1 1220 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 SLFN12Q8IYM2 578 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 MYCT1Q8N699 235 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 MRPS27Q92552 414 aaKnown RBP10.61□□□□□ -0.71
NEK1-203ENST00000507142 KCNQ5Q9NR82 932 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 IFT172Q9UG01 1749 aa10.61□□□□□ -0.71
NEK1-203ENST00000507142 PNMA6FA0A0J9YX94 578 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 LRCH2Q5VUJ6 765 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 MAP4K1Q92918 833 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 PCDHA12Q9UN75 941 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 MAP2P11137 1827 aaKnown RBP10.6□□□□□ -0.71
NEK1-203ENST00000507142 NALCNQ8IZF0 1738 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 TMEM88BA6NKF7 163 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 ZSCAN20P17040 1043 aaPredicted RBP10.6□□□□□ -0.71
NEK1-203ENST00000507142 MARK3P27448 753 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 STAG1Q8WVM7 1258 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 ZNF274Q96GC6 653 aaPredicted RBP10.6□□□□□ -0.71
NEK1-203ENST00000507142 ADPGKQ9BRR6 497 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 CPA4Q9UI42 421 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 ASB14A6NK59 587 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 WNT10BO00744 389 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 NMT2O60551 498 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 F13A1P00488 732 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 TNNT3P45378 269 aaPredicted RBP10.6□□□□□ -0.71
NEK1-203ENST00000507142 TTLL4Q14679 1199 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 TXLNBQ8N3L3 684 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 ATP6V0A1Q93050 837 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 FDX1P10109 184 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 GALNT17Q6IS24 598 aa10.6□□□□□ -0.71
NEK1-203ENST00000507142 DDX19AQ9NUU7 478 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms